Inherited Genetic Variation in Parkinson's Disease: Convergence on Impaired Autophagosome-Lysosome Fusion Through the

Sreemol Gokuladhas1, Catriona Miller1, Antony A Cooper2,3

  • 1The Liggins Institute, University of Auckland, Auckland, 1023, New Zealand.

PubMed

Insights

This study identifies 79 potential causal genes for Parkinson's disease (PD) using Mendelian randomization. It highlights the crucial role of specific gene isoforms and autophagosome-lysosome fusion in PD risk.

Area of Science:

  • Genetics
  • Neuroscience
  • Molecular Biology

Background:

  • Parkinson's disease (PD) pathogenesis is complex, involving intricate genetic interactions.
  • Identifying causal genetic factors and regulatory elements is crucial for understanding PD risk.

Purpose of the Study:

  • To identify causal genes and regulatory elements influencing Parkinson's disease risk.
  • To investigate the role of tissue-specific gene expression and isoforms in PD pathogenesis.

Main Methods:

  • Two-sample Mendelian randomization (MR) was employed.
  • Integration with tissue-specific gene regulatory networks.
  • Functional enrichment analysis and investigation of tissue-specific isoform expression.

Main Results:

  • Seventy-nine putative causal genes for PD were identified.
  • A subset of these genes is located in cytobands previously linked to neurodevelopmental disorders.
  • Autophagosome-lysosome fusion emerged as a key biological process.
  • Ten specific genes demonstrated causal associations with tissue-specific expression patterns influencing PD risk.
  • Isoform-specific expression profiles were found to contribute to disease risk or protection.

Conclusions:

  • Isoform-specific expression of causal genes plays a critical role in modulating Parkinson's disease risk, particularly concerning autophagosome-lysosome fusion.
  • These findings offer new insights into PD susceptibility.
  • Further experimental validation is required to confirm the significance of tissue-specific gene isoforms in PD causal mechanisms.

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