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Reaction Profile Forecasting by Artificial Data Generation for Wittig-Type Geminal Bromofluoroolefination.
Ha Eun Kim1, Jaeseong Jin1, Hyun Woo Kim1
1Department of Chemistry, Gwangju Institute of Science and Technology, Gwangju 61005, Republic of Korea.
This study introduces simple machine learning (ML) models for predicting organic reactions using minimal data. Data augmentation techniques significantly improved model performance, offering a solution for small experimental datasets in reaction development.
Area of Science:
- Organic Chemistry
- Computational Chemistry
- Chemical Informatics
Background:
- Machine learning (ML) is increasingly used in organic synthesis for reaction prediction and optimization.
- Large datasets are typically required for ML models, posing challenges for experimental scientists.
- Existing ML approaches often rely on extensive feature sets and data preparation.
Purpose of the Study:
- To develop simple ML models for predicting reaction profiles in geminal bromofluoroolefination.
- To address the challenge of limited experimental data in ML-driven reaction development.
- To explore the efficacy of data augmentation strategies with minimal feature sets.
Main Methods:
- Developed ML models using minimal, readily accessible features like 13C NMR chemical shifts and Sterimol values.
- Employed a tabular augmentation method by fitting sparse data points to sigmoidal curves.
- Combined data augmentation with a conditional tabular generative adversarial network (CTGAN).
- Utilized a feed-forward neural network (FNN) for prediction.
Main Results:
- Simple ML models achieved effective prediction of reaction profiles with minimal data.
- Tabular data augmentation significantly enhanced the predictive ability of the FNN.
- The combination of augmentation techniques with CTGAN further refined model performance.
- Demonstrated the utility of sigmoidal curve fitting for sparse data augmentation.
Conclusions:
- Tailored data augmentation strategies are effective solutions for small experimental datasets in ML.
- This approach simplifies ML model development for experimental scientists.
- The study provides a pathway for more accessible ML applications in organic synthesis.
- Highlights the potential of CTGAN and sigmoidal augmentation for enhancing ML model accuracy.
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