Related Experiment Video
Updated: Sep 19, 2025

Measurement of mRNA Decay Rates in Saccharomyces cerevisiae Using rpb1-1 Strains
Published on: December 13, 2014
Real-time imaging of transcriptional feedback in nonsense-mediated mRNA decay
Hanae Sato1,2, Md Dobirul Islam1, Tamoghna Das1
1WPI Nano Life Science Institute (NanoLSI), Kanazawa University, Kanazawa, Ishikawa, Japan.
Abstract:
Nonsense-mediated mRNA decay (NMD) is a translation-coupled mRNA decay pathway triggered by a premature termination codon (PTC). While in-frame stop codons are typically defined by cytoplasmic ribosomes, unexpected changes in transcription have been reported in genes containing PTCs. This observation suggests the possibility of PTC detection at the transcription site, which has not been thoroughly investigated with high temporal and spatial resolution. Here we utilize a real-time imaging approach to simultaneously detect transcription sites expressing wild-type or NMD-targeted β-globin reporter genes in the same cell. Our data indicates a dynamic change in the transcription of PTC-containing β-globin mRNA that depends on translation, NMD, and nuclear protein import, supporting the existence of rapid transcriptional feedback following NMD in the cytoplasm. This study establishes a robust temporal link between cytoplasmic mRNA decay and nuclear transcription.
Related Concept Videos
Nonsense-mediated mRNA Decay
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Nuclear Export of mRNA
Transcriptional Regulation: Riboswitches
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability
Chromatin Structure Regulates pre-mRNA Processing
The chromatin structure, especially...
Types of RNA
RNA Performs Diverse...

