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Published on: January 10, 2019
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Multi-class classification of central and non-central geographic atrophy using Optical Coherence Tomography
Medrxiv : the Preprint Server for Health Sciences
|June 10, 2025
Summary
Deep learning models accurately classify geographic atrophy (GA) subtypes from OCT scans. The Vision Transformer (ViT-B/16) model showed superior performance, especially when focusing on foveal regions.
Area of Science:
- Ophthalmology and Medical Imaging
- Artificial Intelligence in Healthcare
- Computational Pathology
Background:
- Geographic atrophy (GA) is an advanced form of age-related macular degeneration (AMD) that leads to irreversible vision loss.
- Accurate classification of GA subtypes is crucial for understanding disease progression and developing targeted therapies.
- Optical Coherence Tomography (OCT) is a key imaging modality for visualizing retinal structures and diagnosing macular diseases.
Purpose of the Study:
- To develop and validate deep learning (DL) models for classifying geographic atrophy (GA) subtypes using Optical Coherence Tomography (OCT) scans.
- To evaluate the performance of different DL architectures (ResNet50, MobileNetV2, Vision Transformer) across four clinical classification tasks.
- To assess the impact of two experimental approaches (using all B-scans vs. selective foveal B-scans) on model accuracy.
Main Methods:
- A retrospective study utilizing 455 OCT volumes from 104 patients, including Central GA (CGA), Non-Central GA (NCGA), and no GA (NGA) cases.
- Implementation of ResNet50, MobileNetV2, and Vision Transformer (ViT-B/16) architectures with transfer learning and data augmentation.
- Models were trained and tested using patient-level data splitting (70:15:15), evaluating performance with AUC-ROC and accuracy metrics.
Main Results:
- The Vision Transformer (ViT-B/16) consistently outperformed other architectures across all classification tasks.
- ViT-B/16 achieved high accuracy in distinguishing GA subtypes (e.g., CGA vs. NCGA: AUC-ROC 0.728, accuracy 0.831) and GA from NGA (AUC-ROC 0.950, accuracy 0.873) using selective B-scans.
- All models demonstrated excellent performance in differentiating GA from other AMD forms (AUC-ROC > 0.998).
Conclusions:
- Deep learning models, particularly ViT-B/16, can successfully classify GA subtypes from OCT scans with clinically relevant accuracy.
- The ViT-B/16 architecture excels due to its ability to capture spatial relationships, improving diagnostic accuracy.
- Utilizing selective B-scans containing foveal regions enhances diagnostic accuracy while reducing computational load, aligning with clinical workflows.
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