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Polyamine Metabolism in Optic Nerve: Spatial Metabolomics with AP/MALDI Mass Spectrometry Imaging
Sean Meehan1, Caleigh O'Connor2, Eugene Moskovets2
1Bascom Palmer Eye Institute, Miller School of Medicine, University of Miami, Miami, FL, USA.
Methods in Molecular Biology (Clifton, N.J.)
|June 11, 2025
Summary
This study showcases matrix-assisted laser desorption/ionization-mass spectrometry imaging (MALDI-MSI) for spatial multiomics. It combines metabolomics and lipidomics to analyze polyamine pathway metabolites and lipids in a mouse optic nerve.
Area of Science:
- Biochemistry
- Neuroscience
- Analytical Chemistry
Background:
- Matrix-assisted laser desorption/ionization-mass spectrometry imaging (MALDI-MSI) is a key technique for spatial omics.
- Integrating multimodal datasets enhances spatial multiomics platforms for comprehensive biological insights.
- Combining metabolomics and lipidomics can significantly improve the throughput of spatial analysis.
Purpose of the Study:
- To detail a protocol for imaging polyamine pathway-related metabolites and lipids in a mouse optic nerve.
- To demonstrate the utility of atmospheric pressure MALDI for multimodal spatial omics.
- To advance the application of MALDI-MSI in neuro-spatial omics research.
Main Methods:
- Utilized atmospheric pressure MALDI-MSI for multimodal spatial omics.
- Performed simultaneous imaging of polyamine pathway metabolites and lipids.
- Applied the protocol to a mouse optic nerve tissue sample.
Main Results:
- Successfully imaged polyamine pathway metabolites and lipids with spatial resolution.
- Demonstrated the feasibility of combining metabolomic and lipidomic data acquisition using MALDI-MSI.
- Provided spatially resolved molecular information from the mouse optic nerve.
Conclusions:
- The presented protocol enables multimodal spatial omics analysis of polyamine metabolites and lipids.
- Atmospheric pressure MALDI-MSI is effective for high-throughput spatial omics in biological tissues.
- This approach offers a powerful tool for understanding molecular distributions in neurological tissues.

