Leveraging autophagy and pyrimidine metabolism to target pancreatic cancer

Suzanne Dufresne1, Ramya S Kuna1, Kristiana Wong1,2

  • 1Molecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA.

Insights

Autophagy inhibitors show promise for pancreatic cancer, but resistance is a challenge. This study reveals metabolic adaptations that can be targeted with pyrimidine analogs to enhance treatment efficacy.

Area of Science:

  • Oncology
  • Molecular Biology
  • Metabolic Research

Background:

  • Autophagy inhibitors are investigated for pancreatic ductal adenocarcinoma (PDA) treatment.
  • Understanding resistance mechanisms to autophagy inhibitors is crucial for clinical efficacy.

Purpose of the Study:

  • To uncover metabolic adaptations that bypass autophagy inhibition in PDA.
  • To identify vulnerabilities associated with acquired resistance to autophagy inhibitors.

Main Methods:

  • Utilized PDA cells with acquired resistance to various autophagy inhibitors.
  • Analyzed metabolic rewiring, focusing on TCA intermediates, nucleotides, and pyruvate metabolism.
  • Investigated pyrimidine salvage pathways versus de novo synthesis.

Main Results:

  • Severe autophagy depletion induces metabolic rewiring to sustain biosynthesis.
  • Long-term autophagy inhibition alters pyruvate metabolism, linked to reduced pyrimidine pools.
  • Resistant cells preferentially salvage pyrimidines, increasing sensitivity to pyrimidine analogs.

Conclusions:

  • Acquired resistance to autophagy inhibition creates a metabolic vulnerability to pyrimidine analogs.
  • Combining autophagy inhibitors with pyrimidine analogs (gemcitabine, trifluridine/tipiracil) shows synergistic effects.
  • This research provides insights into leveraging autophagy inhibition for pancreatic cancer therapy.

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