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Related Concept Videos

Peptide Bonds02:43

Peptide Bonds

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A peptide bond covalently attaches amino acids through a dehydration reaction. One amino acid's carboxyl group and another amino acid's amino group combine, releasing a water molecule. The resulting bond is the peptide bond. The products that such linkages form are peptides. As more amino acids join this growing chain, the resulting chain is a polypeptide. Each polypeptide has a free amino group at one end. This end has the N-terminal, or the amino-terminal, and the other end has a free...
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Mitochondrial precursors are translocated to the internal subcompartments via independent mechanisms involving distinct protein machineries called translocases.
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Mitochondrial outer membrane proteins are of two types: the transmembrane, beta-barrel porins, and the membrane-anchored, alpha-helical proteins. Beta-barrel porin precursors are translocated by the TOM complex and inserted into the outer mitochondrial membrane by the SAM complex. In contrast,...
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What are Proteins?01:28

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Proteins are polymers of amino acids linked together by peptide bonds. Proteins and polypeptides are interchangeably used to refer to long chains of amino acids. However, polypeptides have a molecular weight of fewer than 10,000 daltons, while proteins have greater molecular weight.  Polypeptides with less than 20 amino acids are called oligopeptides or simply peptides. Interactions among the constituent amino acid side chains of proteins help them fold into a stable 3-dimensional...
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Amides are synthesized by treating carboxylic acids with amines in the presence of dehydrating agents like dicyclohexylcarbodiimide (DCC).
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Amino Acid Biosynthetic Pathways01:29

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Amino acid biosynthesis is essential for cell growth, protein synthesis, and metabolic regulation. Cells generate essential and non-essential amino acids from metabolic intermediates to sustain vital biological functions. These intermediates originate from key metabolic pathways: glycolysis, the tricarboxylic acid (TCA) cycle, and the pentose phosphate pathway. Important precursors include α-ketoglutarate, pyruvate, oxaloacetate, phosphoenolpyruvate, and erythrose-4-phosphate, which...
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Updated: Sep 19, 2025

Facile Protocol for the Synthesis of Self-assembling Polyamine-based Peptide Amphiphiles PPAs and Related Biomaterials
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Inverse Peptide Synthesis Using Transient Protected Amino Acids.

Tao Liu1, Junfeng Zhao2

  • 1Affiliated Cancer Hospital, Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, School of Pharmaceutical Sciences, Guangzhou Medical University, Guangzhou, China.

Methods in Molecular Biology (Clifton, N.J.)
|June 18, 2025
PubMed
Summary

This study introduces a green chemistry approach for peptide synthesis using unprotected amino acids, overcoming a 60-year challenge of epimerization with a novel ynamide coupling reagent and transient protection strategy.

Keywords:
Green chemistryPeptide synthesisTransient protectionYnamide coupling reagent

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Area of Science:

  • Organic Chemistry
  • Green Chemistry
  • Biochemistry

Background:

  • Traditional peptide synthesis requires protecting and deprotecting the α-amino group, hindering sustainable development.
  • Using unprotected amino acids is a desirable green strategy but has been unsuccessful due to severe epimerization during N→C elongation.

Purpose of the Study:

  • To overcome the challenge of epimerization in peptide synthesis using unprotected amino acids.
  • To develop a practical and sustainable protocol for green peptide synthesis.

Main Methods:

  • A novel ynamide coupling reagent was employed to implement a transient protection strategy.
  • A one-pot protocol integrated transient protection, activation, aminolysis, and in situ deprotection, avoiding intermediate purification.

Main Results:

  • Successfully overcame the long-standing epimerization issue in N→C peptide chain elongation with unprotected amino acids.
  • Demonstrated a practical protocol for inverse peptide elongation, enabling efficient synthesis.

Conclusions:

  • The developed ynamide coupling method offers a viable and sustainable solution for green peptide synthesis.
  • This approach shows potential for synthesizing long peptides and in solid-phase peptide synthesis.