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Beyond Transposons: TIGD1 as a Pan-Cancer Biomarker and Immune Modulator
Merve Gulsen Bal Albayrak1, Tuğcan Korak1, Gurler Akpinar1
1Department of Medical Biology, Faculty of Medicine, Kocaeli University, Kabaoglu District, Baki Komsuoglu Blvd. No:21, Umuttepe, 41001 Kocaeli, Turkey.
Abstract:
Background/Objectives: TIGD1 (Trigger Transposable Element Derived 1) is a recently identified oncogene with largely unexplored biological functions. Emerging evidence suggests its involvement in multiple cellular processes across cancer types. This study aimed to perform a comprehensive pan-cancer analysis of TIGD1 to evaluate its expression patterns, diagnostic utility, prognostic value, and association with immunotherapy response and drug resistance. Methods: Transcriptomic and clinical data from TCGA and GTEx were analyzed using various bioinformatic tools. Expression profiling, survival analysis, immune correlation studies, gene set enrichment, single-cell sequencing, and drug sensitivity assessments were performed. Results: TIGD1 was found to be significantly upregulated in various tumor types, with notably high expression in colon adenocarcinoma. Elevated TIGD1 expression was associated with poor prognosis in several cancers. TIGD1 levels correlated with key features of the tumor immune microenvironment, including immune checkpoint gene expression, TMB, and MSI, suggesting a role in modulating anti-tumor immunity. GSEA and single-cell analyses implicated TIGD1 in oncogenic signaling pathways. Furthermore, high TIGD1 expression was linked to resistance to several therapeutic agents, including Zoledronate, Dasatinib, and BLU-667. Conclusions: TIGD1 may serve as a promising diagnostic and prognostic biomarker, particularly in colon, gastric, liver, and lung cancers. Its strong associations with immune modulation and therapy resistance highlight its potential as a novel target for precision oncology and immunotherapeutic intervention.
Insights
Trigger Transposable Element Derived 1 (TIGD1) is an oncogene upregulated in many cancers, particularly colon adenocarcinoma. High TIGD1 expression correlates with poor prognosis and therapy resistance, suggesting its potential as a biomarker and therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Genomics
Background:
- Trigger Transposable Element Derived 1 (TIGD1) is a newly identified oncogene with incompletely understood functions.
- Evidence suggests TIGD1's involvement in diverse cellular processes relevant to cancer development.
- A comprehensive pan-cancer analysis is needed to clarify TIGD1's role in oncology.
Purpose of the Study:
- To conduct a pan-cancer analysis of TIGD1 expression, diagnostic value, and prognostic significance.
- To investigate TIGD1's association with the tumor immune microenvironment and response to immunotherapy.
- To explore TIGD1's role in drug resistance and its potential as a therapeutic target.
Main Methods:
- Utilized transcriptomic and clinical data from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) projects.
- Performed expression profiling, survival analysis, immune correlation studies, and gene set enrichment analysis.
- Conducted single-cell sequencing and drug sensitivity assessments to evaluate TIGD1's functional impact.
Main Results:
- TIGD1 was significantly upregulated across multiple cancer types, notably in colon adenocarcinoma.
- Elevated TIGD1 expression correlated with poorer prognosis and was linked to resistance against Zoledronate, Dasatinib, and BLU-667.
- TIGD1 expression associated with tumor immune microenvironment features, including immune checkpoint genes, TMB, and MSI, and implicated in oncogenic pathways.
Conclusions:
- TIGD1 shows promise as a diagnostic and prognostic biomarker for colon, gastric, liver, and lung cancers.
- TIGD1's modulation of anti-tumor immunity and association with therapy resistance highlight its potential as a novel target.
- Further research into TIGD1 could lead to advancements in precision oncology and immunotherapeutic strategies.
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