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Published on: June 3, 2018
Polygenic Risk Prediction for Normal-Tension Glaucoma
Maryam Marzban1, Santiago Diaz Torres1, Regina Yu1
1QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia.
Polygenic risk scores (PRSs) show promise for predicting normal-tension glaucoma (NTG) risk. NTG-specific PRSs were significantly associated with the condition in European ancestry cohorts, suggesting potential for improved early detection.
Area of Science:
- Ophthalmology
- Genetics
- Statistical Genomics
Background:
- Normal-tension glaucoma (NTG) is characterized by optic nerve damage with normal intraocular pressure.
- Polygenic risk scores (PRSs) are emerging tools for glaucoma risk prediction.
- No comprehensive studies have evaluated PRS predictive ability specifically for NTG.
Purpose of the Study:
- To evaluate the predictive ability of PRSs for normal-tension glaucoma (NTG).
- To construct and validate NTG-specific PRSs using genome-wide association study (GWAS) data.
Main Methods:
- Utilized GWAS summary data from a European cohort to develop PRSs for NTG.
- Employed SBayesRC and clumping and thresholding (C+T) methods for PRS computation.
- Validated PRSs in independent European ancestry datasets (All of Us, GOG, QSkin).
Main Results:
- NTG-specific PRSs, particularly using the SBayesRC method, showed significant association with NTG in both discovery and validation cohorts.
- Odds ratios per standard deviation indicated a notable increase in NTG risk associated with higher PRS values.
- The SBayesRC method, incorporating functional annotation, yielded robust predictive results.
Conclusions:
- NTG-specific PRSs demonstrate potential for glaucoma risk prediction, despite current limitations in NTG GWAS sample sizes.
- Future large-scale NTG GWASs could lead to clinically applicable PRSs for personalized risk assessment.
- Improved early detection and risk stratification for NTG may be achievable with advanced PRS development.
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