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Related Experiment Video

Updated: Sep 16, 2025

Lineage Tracing and Clonal Analysis in Developing Cerebral Cortex Using Mosaic Analysis with Double Markers MADM
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Lineage Tracing and Clonal Analysis in Developing Cerebral Cortex Using Mosaic Analysis with Double Markers MADM

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Two parallel lineage-committed progenitors contribute to the developing brain.

Carolyn E Dundes1,2, Rayyan T Jokhai1,2, Hadia Ahsan1,2

  • 1Department of Developmental Biology, Stanford University, Stanford, CA USA.

Biorxiv : the Preprint Server for Biology
|July 9, 2025
PubMed
Summary
This summary is machine-generated.

Two distinct neural progenitors arise during development, forming the forebrain/midbrain and hindbrain. This discovery aids in generating specific hindbrain motor neurons and suggests an ancient evolutionary origin for these dual progenitors.

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Area of Science:

  • Developmental biology
  • Neuroscience
  • Evolutionary biology

Background:

  • The hindbrain is crucial for life.
  • A prevailing model suggests a single neural progenitor forms all brain regions.
  • The origin and lineage commitment of distinct brain progenitors remain incompletely understood.

Purpose of the Study:

  • To investigate the cellular origins of hindbrain development.
  • To challenge the single progenitor model with a dual progenitor hypothesis.
  • To explore the evolutionary conservation of brain progenitors.

Main Methods:

  • Comparative studies of mouse embryos and human pluripotent stem cells (hPSCs).
  • In vitro differentiation assays to assess lineage commitment.
  • Chromatin landscape analysis to identify progenitor identity markers.

Main Results:

  • Identified two simultaneous, parallel progenitors: anterior neural ectoderm (forebrain/midbrain) and posterior neural ectoderm (hindbrain).
  • Demonstrated lineage commitment of these progenitors in vitro.
  • Observed distinct chromatin landscapes correlating with forebrain/midbrain vs. hindbrain identities.
  • Successfully differentiated hPSCs into hindbrain rhombomere 5/6-specific motor neurons.

Conclusions:

  • The brain arises from two distinct, lineage-restricted progenitors, not a single common one.
  • These dual progenitors exhibit unique epigenetic signatures.
  • This dual progenitor model may be conserved from hemichordates to mammals, over 550 million years.
  • The findings facilitate the in vitro generation of specific neuronal subtypes, like hindbrain motor neurons.