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Published on: June 9, 2020
Using Large Genomic Biobanks to Generate Insights into Genetic Kidney Disease
Alexander R Chang1, Janewit Wongboonsin2, Andrew J Mallett3
1Department of Population of Health Sciences, Geisinger, Danville, PA, USA; Center for Kidney Health Research, Geisinger, Danville, PA, USA.
Insights
Genomic biobanks are vital for understanding chronic kidney disease (CKD) genetics. They help identify CKD genes and individuals at high risk, enabling personalized treatments for kidney disorders.
Area of Science:
- Nephrology
- Genetics
- Biobanking
Background:
- Chronic kidney disease (CKD) affects 9% of the global population, posing significant health risks and burdens.
- CKD is a complex disease with genetic, environmental, and traditional risk factors, showing 30-75% heritability.
- Genomic biobanks are crucial for identifying genes and genetic risk factors for CKD.
Purpose of the Study:
- To review the significant contributions of genomic biobanks to understanding CKD genetics.
- To highlight the role of biobanks in identifying novel genetic associations and understanding disease mechanisms.
- To emphasize the importance of biobanks for personalized medicine and early detection of kidney disorders.
Main Methods:
- Leveraging large-scale genomic biobank data.
- Integrating multi-omics technologies (transcriptomics, metabolomics, proteomics).
- Utilizing advanced computational tools for genetic data analysis.
- Developing polygenic risk scores (PRS) for CKD risk stratification.
Main Results:
- Genomic biobanks have identified genes with substantial effects on CKD risk.
- Polygenic risk scores derived from biobank data can identify high-risk individuals.
- Biobanks facilitate early identification and personalized treatment of monogenic kidney diseases.
Conclusions:
- Genomic biobanks are indispensable for advancing the comprehension of CKD genetics.
- Expanding global biobank efforts, especially in diverse populations, is crucial for comprehensive understanding.
- Biobanks fill knowledge gaps, particularly for underrepresented patient groups with milder CKD presentations.
Abstract:
Chronic kidney disease (CKD) affects approximately 9% of the global population, leading to increased risks of end-stage kidney disease (ESKD), cardiovascular disease (CVD), and mortality. Patients with CKD are a huge burden on health care resources globally. CKD is a complex condition influenced by a combination of genetic, environmental, and traditional risk factors. Family studies have suggested heritability rates for CKD ranging from 30% to 75%, and large genomic biobank studies have proven essential in identifying genes with substantial effects on CKD risk and in capturing cumulative genetic risk through polygenic risk scores. These biobanks are crucial for discovering new genes associated with kidney health and disease, and their growing size enhances the power to detect novel genetic associations. Integrating multi-omics technologies such as transcriptomics, metabolomics, and proteomics further enriches our understanding of CKD, while advanced computational tools continue to expand our insights into genetic data. Polygenic risk scores, derived from hundreds of genetic variants with small effect sizes, can help identify individuals at high risk of CKD. Genomic biobanks offer valuable opportunities for early identification and personalized treatment of monogenic kidney disorders, such as autosomal dominant polycystic kidney disease and Alport syndrome. These biobanks help fill knowledge gaps, particularly in individuals with milder or asymptomatic presentations who are often underrepresented in traditional studies. Expanding genomic biobank efforts globally, especially in diverse populations, is vital to enhancing our understanding of the genetic underpinnings of kidney disease. This review highlights the significant contributions of genomic biobanks to advancing our comprehension of the genetics of CKD.
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