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The synaptic architecture of layer 5 thick tufted excitatory neurons in mouse visual cortex
Agnes L Bodor1, Casey M Schneider-Mizell2, Chi Zhang2
1Allen Institute for Brain Science, Seattle, WA, USA. agnesb@alleninstitute.org.
Nature Neuroscience
|July 28, 2025
Summary
This study reveals how mouse visual cortex thick tufted layer 5 pyramidal cells (L5-ETns) connect with other neurons. L5-ETns form specific inhibitory circuits locally and target excitatory cells in other brain regions.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Cellular Neuroscience
Background:
- Understanding synaptic connectivity is crucial for deciphering neural circuit function.
- Characterizing individual excitatory neuron connections in the neocortex remains challenging.
Purpose of the Study:
- To investigate the synaptic connectivity of mouse visual cortex thick tufted layer 5 pyramidal cells (L5-ETns).
- To identify the specific inhibitory and excitatory partners of L5-ETns within the neocortex.
Main Methods:
- Utilized a 1 mm³ electron microscopy dataset of the mouse visual cortex.
- Employed automated approaches for synapse recognition and cell typing.
- Analyzed the local and long-range connectivity patterns of L5-ETns.
Main Results:
- L5-ETns primarily connect with specific inhibitory cell types in their vicinity, which reciprocate the connection.
- The most common excitatory targets of L5-ETns are layer 5 intertelencephalic neurons (L5-ITns) and layer 6 pyramidal cells.
- Long-range connections of L5-ETns show a higher preference for excitatory targets.
Conclusions:
- Identified a circuit motif involving L5-ETns forming a subcircuit with specific inhibitory interneurons.
- The findings provide insights into the specific roles of L5-ETns in cortical processing.
- The automated framework enables future exploration of other neuron type connectivities.
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