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Updated: Sep 13, 2025

Determining the Ice-binding Planes of Antifreeze Proteins by Fluorescence-based Ice Plane Affinity
Published on: January 15, 2014
Atomistic Insights into the Chain-Length-Dependent Antifreeze Activity of Oligoprolines
Wentao Yang1, Yucong Liao1, Zhaoru Sun1
1School of Physical Science and Technology, ShanghaiTech University, Shanghai 201210, China.
Abstract:
Oligoproline is a simple yet highly potent cryoprotectant, but the molecular basis underlying its nonmonotonic ice recrystallization inhibition (IRI) activity depending on the degree of polymerization (DP)─particularly the superior performance of DP = 8 (P8) over longer (e.g., P15) oligomers─remains elusive. Using molecular dynamics simulations, we show that the IRI activity originates from the combined effect of single-molecule conformation and multimolecule aggregation. P8 outperforms P15 primarily due to its higher proportion of the random coil (C) conformation, which effectively enhances ice-binding ability and resistance to ice engulfment than the linear (L) conformation with perfect PPII helix. Moreover, at high concentrations (>40 mg/mL), P15 tends to form soluble amorphous aggregates, reducing its effective coverage on the ice surface and thereby further diminishing its IRI efficiency. These findings provide atomistic insight into the structure-activity relationship of oligoprolines and offer a framework for understanding similar nonmonotonic effects in other antifreeze polymers.
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