Streptococcus pneumoniae synchronizes the states of cell wall peptidoglycan acetylation and genome methylation by

Xiu-Yuan Li1, Ping He1, Shaomeng Wang1

  • 1Center for Infection Biology, School of Basic Medical Sciences, Tsinghua University, Beijing, China.

Plos Pathogens
|August 5, 2025
PubMed

Insights

Bacterial N-acetylmuramic acid (NAM) O-acetylation acts as an extracellular signal, linking nutrient availability to bacterial lifestyle. This modification epigenetically controls Streptococcus pneumoniae colony phase via DNA methylation.

Area of Science:

  • Microbiology
  • Epigenetics
  • Bacterial Pathogenesis

Background:

  • Bacterial cell walls contain peptidoglycan (PG) with N-acetylmuramic acid (NAM) and N-acetylglucosamine (NAG).
  • NAM O-acetylation, a post-biosynthetic modification, enhances resistance to lysozyme but its functional significance remains unclear.
  • The extent of NAM O-acetylation varies with bacterial genetics and growth phase.

Purpose of the Study:

  • To investigate the functional role of NAM O-acetylation in Streptococcus pneumoniae.
  • To determine if NAM O-acetylation serves as an extracellular signal linking metabolism to bacterial phenotype.
  • To elucidate the mechanism by which NAM O-acetylation influences bacterial adaptation.

Main Methods:

  • Analysis of NAM O-acetylation levels in Streptococcus pneumoniae under varying nutrient conditions.
  • Investigation of the correlation between NAM O-acetylation and colony phase variation (opaque vs. transparent).
  • Assessment of DNA methyltransferase activity and genome methylation patterns (methylome) in relation to O-acetylation status.
  • Identification of bacterial proteins involved in mediating the O-acetylation-dependent epigenetic control.

Main Results:

  • NAM O-acetylation functions as an extracellular signal correlating with cellular acetyl-CoA levels and glucose availability.
  • O-acetylation controls reversible switching between opaque and transparent colony phases by modulating DNA methyltransferase gene inversion.
  • The presence of NAM O-acetylation leads to the HsdSA1 methylome and opaque colony phase, while its absence favors the HsdSA3 methylome and transparent phenotype.
  • Bacterial autolysin LytA and other proteins are essential for O-acetylation-mediated epigenetic regulation.

Conclusions:

  • Streptococcus pneumoniae utilizes NAM O-acetylation as an extracellular marker of cellular acetyl-CoA levels.
  • This modification epigenetically modulates bacterial metabolism and lifestyle in response to nutrient availability.
  • NAM O-acetylation synchronizes bacterial adaptation with environmental cues through epigenetic control of gene expression.

Related Concept Videos

Peptidoglycan Synthesis01:28

Peptidoglycan Synthesis

Structure of PeptidoglycanPeptidoglycan is a vital structural component of the bacterial cell wall, providing mechanical strength and shape to the cell. It consists of repeating units of two sugars—N-acetylglucosamine (NAG) and N-acetylmuramic acid (NAM)—linked by β-1,4 glycosidic bonds. These sugar chains are cross-linked by short peptide chains, forming a mesh-like polymer that surrounds the bacterial plasma membrane.Cytoplasmic Phase – Precursor SynthesisPeptidoglycan...
422
Bacterial Cell Wall01:22

Bacterial Cell Wall

The bacterial cell wall is an essential structural component that encases the plasma membrane, preserving cellular integrity, determining shape, and protecting against osmotic stress. This rigid yet flexible structure primarily comprises peptidoglycan, a polymer that forms a mesh-like matrix conferring mechanical strength and flexibility.Peptidoglycan Composition and StructurePeptidoglycan, the core of the bacterial cell wall, comprises alternating units of N-acetylglucosamine (NAG) and...
636
Coordination of Gene Expression Processes in Bacteria01:29

Coordination of Gene Expression Processes in Bacteria

The DNA replication, transcription, and translation processes are intricately coupled in bacteria, allowing efficient gene expression and rapid protein synthesis. While this physical and functional coordination is advantageous, it introduces challenges that bacteria overcome through specific regulatory mechanisms.Coupling of Replication, Transcription, and TranslationThe coupling of replication, transcription, and translation is a hallmark of bacterial gene expression. As the replisome unwinds...
149
Cytoskeletal Proteins in Bacteria01:29

Cytoskeletal Proteins in Bacteria

Bacterial cells were initially considered simple, randomly organized structures lacking a cytoskeleton. However, the discovery of cytoskeleton homologs in bacteria led to the change of this opinion. Bacterial cytoskeletal filaments regulate the cell shape, cell polarity, cell division, and partitioning of plasmids during cell division. It was later discovered that bacterial cytoskeletal proteins, mainly actin and tubulin homologs, are diverse compared to their eukaryotic counterparts. On the...
3.5K
Archaeal Cell Wall01:29

Archaeal Cell Wall

Archaeal cell walls are structurally and compositionally distinct from their bacterial counterparts, lacking the characteristic peptidoglycan layer found in most bacteria. Instead, archaeal cell walls exhibit remarkable diversity, utilizing materials such as pseudomurein, polysaccharides, and proteins to construct their protective outer layers. This structural flexibility is closely tied to archaea's ecological adaptability.S-Layers: The Common Archaeal Cell WallThe S-layer is the most...
262
Transcription Attenuation in Prokaryotes02:42

Transcription Attenuation in Prokaryotes

Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure.  Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
16.0K