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FTIR-based profiling of sinusitis: Stabilized feature selection through Boruta and Monte Carlo methods.
Przemysław Raczkiewicz1, Adrian Odrzywolski1, Maryna Khalavka2
1Department of Biochemistry and Molecular Biology, Medical University of Lublin, 20-093 Lublin, Poland.
Fourier-transform infrared (FTIR) spectroscopy shows promise for diagnosing sinusitis using serum samples. This non-invasive method achieved 94% accuracy, identifying key spectral regions for disease detection.
Area of Science:
- Biomedical Spectroscopy
- Analytical Chemistry
- Medical Diagnostics
Background:
- Sinusitis diagnosis currently lacks rapid, non-invasive methods.
- Biochemical changes in sinusitis patients may be detectable in serum.
- Fourier-transform infrared (FTIR) spectroscopy offers potential for biochemical analysis.
Purpose of the Study:
- To investigate the utility of serum FTIR spectroscopy for sinusitis diagnosis.
- To identify spectral features indicative of sinusitis.
- To develop a non-invasive diagnostic approach for sinusitis.
Main Methods:
- Serum samples from sinusitis patients and healthy controls were analyzed using FTIR spectroscopy.
- A two-stage feature selection framework (Boruta, Monte Carlo) was employed.
- Support Vector Machine (SVM) classification and dimensionality reduction (PCA, UMAP, t-SNE) were utilized.
Main Results:
- A spectral band between 3400-3550 cm⁻¹ was consistently identified as important for discrimination.
- Eighteen consensus features enabled an SVM to achieve 94% accuracy on a held-out set.
- Distinct clustering of patient and control groups was observed using dimensionality reduction techniques.
Conclusions:
- Serum-based FTIR spectroscopy, coupled with advanced feature selection, shows potential as a non-invasive diagnostic aid for sinusitis.
- The high-wavenumber spectral region (3400-3550 cm⁻¹) robustly carries disease-related biochemical information.
- Further comparative studies are warranted to validate these findings in broader populations.
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