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Related Experiment Video

Updated: Sep 11, 2025

Augmenting Large Language Models via Vector Embeddings to Improve Domain-Specific Responsiveness
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Harmonizing organ-at-risk structure names using open-source large language models.

Adrian Thummerer1, Matteo Maspero2, Erik van der Bijl3

  • 1Department of Radiation Oncology, LMU University Hospital, LMU Munich, Munich, Germany.

Physics and Imaging in Radiation Oncology
|August 12, 2025
PubMed
Summary
This summary is machine-generated.

Open-source large language models (LLMs) accurately renamed organs-at-risk (OARs) structures using standardized nomenclature. Reasoning-enhanced LLMs showed superior performance, facilitating AI development in radiation oncology.

Keywords:
AAPM TG-263LLMsLarge language modelsStructure renaming

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Area of Science:

  • Radiation Oncology
  • Artificial Intelligence
  • Natural Language Processing

Background:

  • Standardized nomenclature for radiotherapy structures is essential for automation, collaboration, and AI studies.
  • Current implementation of nomenclature guidelines (AAPM-TG-263) faces challenges.
  • Automated OAR renaming is needed for multi-institutional and multilingual datasets.

Purpose of the Study:

  • To evaluate open-source large language models (LLMs) for automated organ-at-risk (OAR) renaming.
  • To assess LLM performance on a diverse, multi-institutional, and multilingual dataset.
  • To compare reasoning vs. non-reasoning LLMs and uncertainty estimation methods.

Main Methods:

  • Four open-source LLMs (Llama 3.3, Llama 3.3 R1, DeepSeek V3, DeepSeek R1) were tested.
  • A dataset of 34,177 OAR structures from 1684 patients was used.
  • Few-shot prompting and Monte Carlo sampling for uncertainty were employed.

Main Results:

  • High renaming accuracy was achieved, with DeepSeek R1 reaching 98.6% unique accuracy.
  • Reasoning-enhanced LLMs outperformed non-reasoning models.
  • Monte Carlo sampling demonstrated better error correlation and detection than prompt-based confidence.

Conclusions:

  • Open-source LLMs can accurately harmonize OAR nomenclature across diverse datasets.
  • LLMs facilitate TG-263 adoption and the creation of standardized datasets for research.
  • Reasoning LLMs are promising for AI development in radiation oncology.