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Published on: December 26, 2016
Multitarget Design of Steroidal Inhibitors Against Hormone-Dependent Breast Cancer: An Integrated In Silico Approach
Juan Rodríguez-Macías1, Oscar Saurith-Coronell2, Carlos Vargas-Echeverria2
1Facultad de Ciencias de la Salud, Exactas y Naturales, Universidad Libre, Barranquilla 080001, Colombia.
Abstract:
Hormone-dependent breast cancer, particularly in its treatment-resistant forms, remains a significant therapeutic challenge. In this study, we applied a fully computational strategy to design steroid-based compounds capable of simultaneously targeting three key receptors involved in disease progression: progesterone receptor (PR), estrogen receptor alpha (ER-α), and HER2. Using a robust 3D-QSAR model (R2 = 0.86; Q2_LOO = 0.86) built from 52 steroidal structures, we identified molecular features associated with high anticancer potential, specifically increased polarizability and reduced electronegativity. From a virtual library of 271 DFT-optimized analogs, 31 compounds were selected based on predicted potency (pIC50 > 7.0) and screened via molecular docking against PR (PDB 2W8Y), HER2 (PDB 7JXH), and ER-α (PDB 6VJD). Seven candidates showed strong binding affinities (ΔG ≤ -9 kcal/mol for at least two targets), with Estero-255 emerging as the most promising. This compound demonstrated excellent conformational stability, a robust hydrogen-bonding network, and consistent multitarget engagement. Molecular dynamics simulations over 100 nanoseconds confirmed the structural integrity of the top ligands, with low RMSD values, compact radii of gyration, and stable binding energy profiles. Key interactions included hydrophobic contacts, π-π stacking, halogen-π interactions, and classical hydrogen bonds with conserved residues across all three targets. These findings highlight Estero-255, alongside Estero-261 and Estero-264, as strong multitarget candidates for further development. By potentially disrupting the PI3K/AKT/mTOR signaling pathway, these compounds offer a promising strategy for overcoming resistance in hormone-driven breast cancer. Experimental validation, including cytotoxicity assays and ADME/Tox profiling, is recommended to confirm their therapeutic potential.
Insights
Computational design yielded novel steroid-based compounds targeting progesterone receptor (PR), estrogen receptor alpha (ER-α), and HER2. Estero-255 shows promise for overcoming treatment-resistant hormone-driven breast cancer.
Area of Science:
- Medicinal Chemistry
- Computational Drug Design
- Oncology
Background:
- Hormone-dependent breast cancer, especially resistant forms, presents a major clinical challenge.
- Targeting multiple key receptors like progesterone receptor (PR), estrogen receptor alpha (ER-α), and HER2 is crucial for effective treatment.
Purpose of the Study:
- To computationally design novel steroid-based compounds for simultaneous multitargeting of PR, ER-α, and HER2.
- To identify molecular features predictive of high anticancer activity against hormone-dependent breast cancer.
Main Methods:
- Developed a 3D-QSAR model (R²=0.86, Q²LOO=0.86) from 52 steroidal structures.
- Screened 271 DFT-optimized analogs using molecular docking against PR, HER2, and ER-α.
- Performed 100 ns molecular dynamics simulations on top-ranked candidates.
Main Results:
- Identified increased polarizability and reduced electronegativity as key features for anticancer potential.
- Seven compounds exhibited strong binding affinities (ΔG ≤ -9 kcal/mol) to at least two targets.
- Estero-255 demonstrated superior conformational stability, hydrogen bonding, and multitarget engagement.
Conclusions:
- Estero-255, Estero-261, and Estero-264 are promising multitarget drug candidates for resistant hormone-driven breast cancer.
- These compounds may disrupt the PI3K/AKT/mTOR pathway, offering a novel therapeutic strategy.
- Further experimental validation (cytotoxicity, ADME/Tox) is recommended.
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