Solvation Free Energies of Anions: From Curated Reference Data to Predictive Models
Thomas Nevolianis1, Jonathan W Zheng2, Simon Müller3
1Institute of Technical Thermodynamics, RWTH Aachen University, Aachen 52062, Germany.
This study introduces new databases and graph neural network models for predicting ion properties like pKa and solvation free energies. These accurate, accessible tools improve computational chemistry predictions for solubility and lipophilicity.
Area of Science:
- Computational Chemistry
- Physical Chemistry
- Machine Learning in Chemistry
Background:
- Accurate prediction of physicochemical properties (solubility, lipophilicity) is crucial for ionizable solutes.
- Reliable prediction methods require high-quality reference data for solvation free energies of ions, which is currently limited.
- Existing computational methods face challenges due to data scarcity and accuracy.
Purpose of the Study:
- To address the limitations in data quality and availability for ionic property prediction.
- To develop accurate and inexpensive computational models for predicting pKa, gas-phase acidities, and solvation free energies of anions.
- To provide publicly accessible databases and machine learning models for ionic phenomena.
Main Methods:
- Compiled and curated databases for pKa (8,241 points, 8 solvents) and gas-phase acidities (5,536 points) using QM calculations.
- Calculated solvation free energies for anions (6,090) and neutral conjugate solutes (6,088) using thermodynamic cycles and COSMO-RS.
- Trained graph neural network (GNN) models using reaction SMILES for pKa/gas-phase acidity and SMILES for anions to predict solvation energies.
Main Results:
- The microscopic pKa model achieved high accuracy (0.58-0.59 MAE) on unseen data and the SAMPL7 challenge.
- Gas-phase acidity models showed mean absolute errors slightly above 2 kcal/mol against experimental data.
- Anionic solvation free energy models demonstrated mean absolute errors below 3 kcal/mol, comparable to QM-based methods.
Conclusions:
- The developed GNN models offer a fast and accurate alternative to traditional QM approaches for predicting ionic properties.
- The publicly available databases and models significantly enhance data availability and quality for ionic phenomena research.
- These advancements facilitate more reliable predictions of essential physicochemical properties for ionizable solutes.
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