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Coupled Binuclear Copper Sites in Biology: An Experimentally-Calibrated Computational Perspective
Agnieszka Stańczak1, Ioannis Kipouros2, Petr Eminger1
1Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo náměstí 2, 166 10, Praha 6, Czech Republic.
Coupled-binuclear copper enzymes utilize a [Cu2O2] core for phenol oxidation. Recent studies combining spectroscopy, kinetics, and computation reveal the mechanism of tyrosinase-catalyzed ortho-hydroxylation.
Area of Science:
- Biochemistry
- Bioinorganic Chemistry
- Computational Chemistry
Background:
- Coupled-binuclear copper (CBC) enzymes feature a [Cu2O2] catalytic core.
- These enzymes perform challenging regioselective oxidations of phenols.
- Previous understanding of CBC enzyme reactivity factors was incomplete.
Purpose of the Study:
- To elucidate the initial mechanistic steps of ortho-hydroxylation catalyzed by tyrosinase (Ty).
- To review and integrate experimental and computational findings on CBC enzyme reactivity.
- To explore structure-function correlations across CBC enzyme classes.
Main Methods:
- Synergy of spectroscopy and kinetic experiments.
- State-of-the-art computational methods (QM/MM, WFT).
- Calibrated theoretical calculations validated by experimental data.
Main Results:
- A conclusive mechanistic picture of tyrosinase's initial ortho-hydroxylation stages was established.
- Definitive insight into the catalytic reaction coordinate was achieved.
- Previous structure-function correlation efforts were critically reviewed.
Conclusions:
- Mechanistic understanding across CBC enzyme classes can reveal structure-function correlations.
- Potential for utilizing the [Cu2O2] core in materials and biocatalysis.
- Advanced computational and experimental synergy is key to understanding metalloenzyme catalysis.
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