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Outlook on zero/ultrashort echo time techniques in functional MRI
Silvia Mangia1, Shalom Michaeli1, Olli Gröhn2
1Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Minneapolis, Minnesota, USA.
Magnetic Resonance in Medicine
|September 6, 2025
Summary
New functional MRI (fMRI) methods using zero/ultrashort echo time (TE) offer an alternative to traditional echo planar imaging (EPI). These techniques overcome EPI limitations, enabling advanced research applications.
Area of Science:
- Magnetic Resonance Imaging
- Neuroimaging
- Biophysics
Background:
- Blood oxygenation level-dependent (BOLD) contrast using echo planar imaging (EPI) is the standard for functional MRI (fMRI).
- EPI-based fMRI faces challenges like motion sensitivity, signal dropouts, and acoustic noise.
- Alternative fMRI strategies are needed to overcome these limitations.
Purpose of the Study:
- To provide an overview of free induction decay (FID)-based fMRI techniques using zero/ultrashort echo time (TE).
- To compare the benefits and drawbacks of zero/ultrashort TE fMRI with conventional EPI-based fMRI.
- To discuss the potential of zero/ultrashort TE fMRI for future research and clinical applications.
Main Methods:
- Review of free induction decay (FID)-based functional MRI (fMRI) techniques.
- Comparison of zero/ultrashort echo time (TE) fMRI with conventional echo planar imaging (EPI)-based fMRI.
- Discussion of initial findings and ongoing developments in zero/ultrashort TE fMRI.
Main Results:
- Zero/ultrashort TE fMRI techniques inherently address many EPI-based fMRI shortcomings.
- Robust functional contrast has been demonstrated in human and animal studies using zero/ultrashort TE fMRI, primarily through inflow effects.
- These novel methods show promise for applications where EPI is limited.
Conclusions:
- Zero/ultrashort TE fMRI presents a powerful alternative to EPI-based fMRI.
- This technique is expected to advance basic, clinical, and preclinical research, particularly in challenging scenarios.
- Future applications include ultrahigh magnetic fields, awake animal studies, multimodal imaging, and non-brain fMRI.

