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Updated: May 12, 2026

Next-generation Sequencing of 16S Ribosomal RNA Gene Amplicons
Published on: August 29, 2014
Assessment of source and storage conditions on bacterial composition of mineral packaged water using amplicon
Beatriz S Silva1, Francesca De Filippis2, Manolo Laiola3
1Department of Food Science and Nutrition, Faculty of Food Engineering, University of Campinas, Campinas, SP, Brazil.
Abstract:
The consumption of water of low microbiological quality can be detrimental and may cause significant health issues. Thus, amplicon sequencing can be an advantageous method to observe bacterial diversity in water. This study aimed to understand the complex bacterial communities present in natural mineral water packaged in 20 L returnable containers through amplicon sequencing. A high bacterial diversity was found in natural mineral water. Forty-eight bacterial genera were most abundant in the natural mineral water of different brands analyzed. These genera included Blastomonas, Brevundimonas, Gemmata, Methylobacterium, Mycobacterium, Nevskia, Nocardioides, Phenylobacterium, Pimelobacter, Ramlibacter, Rhodobacter, Sphingomonas, and Xenophilus. Also, a high bacterial diversity was found between the mineral waters brands tested in this study. Storage conditions were also shown to affect bacterial composition. Several genera known to contain pathogenic and opportunistic pathogenic species that may impact consumers' health were detected in the water samples examined.
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