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Tracking Copper sensing operon Repressor (CsoR) oligomerization in solution using Electron Paramagnetic Resonance

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Mycobacterium tuberculosis copper-sensing repressor (CsoR) exists as a tetramer in equilibrium with dimers. DNA binding affects protein exchange, influencing transcription regulation.

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Area of Science:

  • Biochemistry
  • Molecular Biology
  • Structural Biology

Background:

  • Protein oligomerization is crucial for cellular functions.
  • Copper-sensing operon repressor (CsoR) regulates the cso operon in Mycobacterium tuberculosis.
  • CsoR dissociation from DNA upon copper binding enables transcription.

Purpose of the Study:

  • To investigate the oligomeric state of Mycobacterium tuberculosis CsoR.
  • To determine how DNA binding affects CsoR's oligomeric state and dynamics.
  • To elucidate the role of CsoR oligomerization in transcriptional regulation.

Main Methods:

  • Electron paramagnetic resonance (EPR) spectroscopy, including continuous wave and double electron-electron resonance (DEER).
  • Site-directed spin labeling to probe protein structure and dynamics.
  • Analysis of EPR data to determine oligomeric states and inter-spin distances.

Main Results:

  • CsoR exists predominantly as a tetramer in equilibrium with a dimer population, irrespective of DNA binding.
  • EPR data revealed distinct mobile (dimer) and immobile (tetramer) components.
  • DNA binding did not alter the tetramer-dimer equilibrium but affected the exchange rate between protein units.

Conclusions:

  • CsoR maintains a dynamic equilibrium between tetrameric and dimeric states.
  • DNA interaction modulates CsoR protein exchange dynamics, contributing to transcriptional control.
  • Understanding CsoR oligomerization provides insights into bacterial gene regulation mechanisms.