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Pets in the household increase ocular surface microbiome exchanges between dog and owner
Suzanne Bianca Clougher1, Camilla Miorelli2, Annalisa Astolfi3,4
1Ophthalmology Unit, DIMEC, Alma Mater Studiorum Università di Bologna, Italy.
One Health (Amsterdam, Netherlands)
|September 17, 2025
Summary
Dog and owner ocular microbiomes share similarities, with small dogs showing greater sharing. Lifestyle factors, like cohabiting with other pets, influence this microbial exchange, emphasizing a One Health approach.
Area of Science:
- Microbiology
- Human-Animal Interactions
- One Health
Background:
- Increasing pet ownership highlights microbial exchange between humans and animals.
- Previous studies show shared skin, oral, and gut microbiomes between dogs and owners.
- The ocular surface microbiome's shared characteristics between dogs and owners remain understudied.
Purpose of the Study:
- To investigate the sharing of the ocular surface microbiome between dogs and owners.
- To characterize dog and owner ocular microbiomes.
- To evaluate lifestyle factors impacting microbiome similarity.
Main Methods:
- Collected conjunctival swabs from 15 dog-owner pairs.
- Performed DNA extraction and 16S rRNA V3-V4 gene sequencing.
- Analyzed microbiome composition, alpha diversity, and beta diversity (weighted UniFrac, unweighted UniFrac, Bray-Curtis).
Main Results:
- Dog and owner ocular microbiomes showed similar overall composition (phyla, families) but distinct clusters.
- Dogs possessed a significantly more diverse ocular microbiome than owners.
- Smaller dogs exhibited greater microbiome sharing with owners compared to larger dogs.
- Pairs cohabiting with other pets displayed more similar microbiome compositions.
Conclusions:
- Significant sharing of the ocular surface microbiome exists between dogs and owners.
- Microbiome similarity is influenced by dog size and the presence of other pets in the household.
- Findings support a One Health perspective on understanding human-animal microbial interactions.

