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A High-throughput Assay for the Prediction of Chemical Toxicity by Automated Phenotypic Profiling of Caenorhabditis elegans
Published on: March 14, 2019
AI-driven hazard prioritization of plastic additives using Tox21 bioassays and self-supervised graph transformers
Donghyeon Kim1, Eungyeong Lee2, Youngmin Yi3
1School of Environmental Engineering.
This study screened over 400 plastic additives for toxicity using AI models and Tox21 bioassays. Researchers identified 78 highly active chemicals, revealing data gaps and supporting safer chemical assessment.
Area of Science:
- Environmental Chemistry
- Toxicology
- Artificial Intelligence
Background:
- Plastic additives can leach into the environment, posing potential toxicity risks.
- Over 400 high-volume plastic additives are listed by the ECHA Plastic Additives Initiative.
- Assessing the toxicity of these additives is crucial for environmental and human health.
Purpose of the Study:
- To screen the potential toxicity of numerous plastic additives.
- To apply deep learning models and Tox21 bioassay data for chemical hazard assessment.
- To identify highly active plastic additives and investigate their existing hazard data.
Main Methods:
- Collected and utilized the Tox21 dataset with extensive bioactivity profiles.
- Trained and fine-tuned the GROVER deep learning algorithm on Tox21 bioassay data.
- Evaluated model performance using the F1 score and compared with baseline algorithms.
- Investigated hazard information and GHS classifications for identified active chemicals.
Main Results:
- The GROVER model demonstrated superior performance compared to traditional machine learning algorithms.
- Identified 78 highly active chemicals among 171 screened plastic additives.
- Revealed significant data gaps in hazard information for potentially toxic plastic additives.
- Highlighted the utility of AI models as New Approach Methodologies (NAMs) for hazard assessment.
Conclusions:
- Advanced AI models like GROVER can effectively screen plastic additives for toxicity.
- The study identified key plastic additives requiring further toxicological investigation.
- This approach supports regulatory decision-making and aligns with the 3Rs principle for animal testing.
- Modernizing chemical hazard assessment through AI is feasible and beneficial.
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