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Exact Computation of Transfer Entropy with Path Weight Sampling
Avishek Das1, Pieter Rein Ten Wolde1
1AMOLF, Science Park 104, 1098 XG, Amsterdam, The Netherlands.
We developed transfer entropy-path weight sampling (TE-PWS), an exact computational method to quantify information flow. This new algorithm overcomes limitations of previous approximations, enabling precise analysis in complex systems.
Area of Science:
- Information Theory
- Computational Neuroscience
- Complex Systems
Background:
- Quantifying directional information flow is crucial for understanding natural and engineered systems.
- Transfer entropy is a key measure for information flow but often relies on uncontrolled approximations.
- Existing methods struggle with complex models, including those with hidden variables, nonlinearity, and feedback.
Purpose of the Study:
- Introduce a novel computational algorithm, transfer entropy-path weight sampling (TE-PWS), for exact transfer entropy quantification.
- Enable precise measurement of information flow in diverse stochastic models.
- Address limitations of approximate methods in complex dynamical systems.
Main Methods:
- Developed TE-PWS, a computational algorithm leveraging polymer and path sampling techniques.
- Computed transfer entropy as a Monte Carlo average over signal trajectory space.
- Applied TE-PWS to linear and nonlinear systems, including those with feedback.
Main Results:
- TE-PWS allows exact quantification of transfer entropy for any stochastic model.
- Demonstrated that common approximate methods yield significant systematic errors and high computational costs.
- Showcased TE-PWS's ability to handle complex scenarios like multiple hidden variables, nonlinearity, and feedback.
Conclusions:
- TE-PWS provides an exact and efficient method for calculating transfer entropy.
- The study highlights the inaccuracies of previously used approximate methods.
- TE-PWS offers a powerful tool for analyzing information flow in complex systems, overcoming challenges posed by feedback loops.
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