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Published on: August 13, 2011
Computational design of Fusarium solani cutinase variants for efficient polylactide and polyethylene terephtalate
Carlos Murguiondo1, Mario García de Lacoba1, Alejandro García-Miró1
1Centro de Investigaciones Biológicas Margarita Salas (CIB), Consejo Superior de Investigaciones Científicas (CSIC), Ramiro de Maeztu 9, 28040, Madrid, Spain.
Abstract:
Poly(lactic acid) (PLA) is among the most widely produced bioplastics worldwide and, given its limited biodegradability, sustainable solutions for its recycling are needed. The efficiency of enzymatic depolymerization depends on enzyme stability and activity under industrial conditions. This study focuses on engineering the cutinase from Fusarium solani (FsC), a promising enzyme for polyester hydrolysis, to enhance its thermostability and catalytic performance. Two computational strategies were employed: SCANEER, leveraging co-evolutionary analysis to optimize catalytic efficiency, and FireProt, integrating evolutionary and structural data to predict thermostabilizing mutations. The designed variants, FsC-sc (A32P/I55V) and FsC-fp (S54M/N106Y/S129A/S135P/S181L), were produced in Komagataella phaffii, evaluating their thermostability and depolymerizing activity. Compared to both the wild type and variant FsC-sc, FsC-fp exhibited superior thermal stability, maintaining full activity for 24 h at 50 °C and showing substantial resistance to deactivation at 60 °C. Additionally, FsC-fp demonstrated increased catalytic activity against PLA (23 % higher) and PET. Computational simulations aligned with experimental results, predicting higher kcat and binding affinity for the engineered variants. Structural analysis revealed that these mutations altered the geometry of the catalytic pocket, and increased surface hydrophobicity in FsC-fp, enhancing substrate interaction. This work highlights the efficacy of computational enzyme design in developing biocatalysts for industrial plastic recycling.
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