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Evolution of Potentially Actionable Genomic Alterations in Advanced Prostate Cancer: A Real-World Analysis of Serial
Miguel Muniz1, L Jill Tsai2, Jacob J Orme1
1Department of Medical Oncology, Mayo Clinic, Rochester, MN 55905, USA.
Cancers
|September 27, 2025
Summary
Serial circulating tumor DNA (ctDNA) testing frequently reveals new, actionable genomic alterations in advanced prostate cancer patients, aiding in monitoring clonal evolution. This noninvasive approach offers valuable insights for potential therapeutic targets and clinical trial enrollment.
Area of Science:
- Oncology
- Genomics
- Molecular Diagnostics
Background:
- Longitudinal genomic profiling using serial circulating tumor DNA (ctDNA) testing provides a noninvasive method for monitoring clonal evolution in advanced prostate cancer.
- Real-world data on the frequency and characteristics of newly emergent, actionable genomic alterations detected via serial ctDNA testing is limited.
Purpose of the Study:
- To evaluate the frequency and nature of newly emergent and potentially actionable genomic alterations identified through serial ctDNA testing in advanced prostate cancer patients.
- To assess the clinical relevance of these alterations for on-label therapies, off-label therapies, and clinical trials.
Main Methods:
- Retrospective analysis of advanced prostate cancer patients undergoing serial Guardant360 ctDNA testing (October 2020 - March 2023).
- Identification of new genomic alterations absent in baseline tests, focusing on those with therapeutic implications.
- Analysis of tumor mutational burden (TMB) changes and treatment outcomes in a subset of patients.
Main Results:
- Among 479 patients with multiple ctDNA tests, 57.8% showed new, potentially actionable alterations.
- These alterations were relevant for on-label therapies (16.7%), off-label therapies (16.5%), and clinical trials (55.7%).
- Tumor mutational burden (TMB) increased from low to high in 11% of patients; limited treatment responses were observed with targeted therapies and immunotherapy.
Conclusions:
- Serial ctDNA testing is valuable for detecting emergent genomic alterations and capturing clonal dynamics in advanced prostate cancer.
- These findings highlight the potential of serial genomic profiling to identify actionable therapeutic targets.
- Further research is needed to establish optimal retesting frameworks and treatment decision-making strategies based on serial ctDNA results.

