DNA damage checkpoints balance a tradeoff between diploid- and polyploid-derived arrest failures

Kotaro Fujimaki1, Ashwini Jambhekar2, Galit Lahav2

  • 1Department of Systems Biology, Blavatnik Institute at Harvard Medical School, Boston, MA 02115, USA.

Cell Reports
|September 28, 2025
PubMed

Insights

The DNA damage checkpoint system prevents cell division with DNA damage. Strengthening one checkpoint unexpectedly worsened another, revealing a tradeoff that minimizes overall genomic errors.

Area of Science:

  • Cellular Biology
  • Genomics
  • Molecular Biology

Background:

  • The DNA damage checkpoint system is crucial for maintaining genomic integrity.
  • It primarily operates through G1/S and G2/M checkpoints to prevent damaged cell division.
  • The collective error-minimization mechanisms of these checkpoints remain incompletely understood.

Purpose of the Study:

  • To investigate how the G1/S and G2/M checkpoints collectively minimize errors in non-cancerous human cells.
  • To identify the pathways and consequences of checkpoint failure under DNA damage.
  • To explore the inherent tradeoffs within the DNA damage response system.

Main Methods:

  • Exposing non-cancerous human cells to DNA damage.
  • Utilizing single-cell imaging to monitor spontaneous cell cycle arrest failure.
  • Employing simulations and experimental validation to analyze checkpoint tradeoffs.

Main Results:

  • Identified two major error routes: mitotic skipping (G2/M engagement) followed by endoreplication (G1/S escape), and direct G2/M checkpoint escape.
  • Observed distinct ploidy, nuclear morphology, and micronuclei composition resulting from these pathways.
  • Demonstrated that enhancing one checkpoint paradoxically exacerbated the other, indicating an inherent tradeoff.

Conclusions:

  • The DNA damage checkpoint system minimizes total genomic error by allowing both identified failure routes to occur at sub-optimal frequencies, rather than completely preventing either.
  • This strategy highlights a balance between preventing catastrophic errors and allowing for controlled, albeit imperfect, cell division.
  • Findings suggest a complex regulatory network where tradeoffs are essential for overall genomic stability.

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