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7T MRI Automated Software Segmentation of the Hippocampus for Epilepsy: Prospective Performance Evaluation
Brian J Burkett1, Andrew J Fagan2, Krystal M Kirby2,3
1From the Department of Radiology (B.J.B., A.J.F., K.M.K., Z.A., D.J.B., K.N.K., S.A.M., R.J.W., K.M.W.), Mayo Clinic, Rochester, Minnesota burkett.brian@mayo.edu.
AJNR. American Journal of Neuroradiology
|October 9, 2025
Summary
Automated hippocampus volume measurement using 7T MRI shows high reproducibility but frequent errors compared to 3T MRI. Further development is needed for accurate epilepsy imaging.
Area of Science:
- Neuroimaging
- Medical Physics
Background:
- 7T MRI offers advanced visualization for epilepsy imaging.
- Hippocampus volume quantification is a key biomarker for epilepsy.
- Automated tools are needed to leverage 7T MRI's potential.
Purpose of the Study:
- Evaluate automated hippocampal volume measurement software at 7T MRI.
- Compare performance against 3T MRI and manual segmentation.
- Assess software accuracy and reproducibility in epilepsy patients and controls.
Main Methods:
- Prospective 7T MRI acquisition in 50 participants.
- Automated hippocampal segmentation using FreeSurfer and NeuroQuant at 3T and 7T.
- Comparison with manual segmentation and intraclass correlation coefficient (ICC) analysis.
Main Results:
- Higher segmentation error rates at 7T vs. 3T for both software packages.
- Poor correlation between 7T automated and manual segmentation (ICC < 0.4).
- Fair to good correlation between 7T and 3T volumes; excellent reproducibility at 7T for automated software.
Conclusions:
- Automated 7T MRI hippocampus volumetry has high reproducibility but significant segmentation errors.
- Current automated tools show suboptimal correlation with 3T MRI and manual measurements.
- Further development of 7T-specific segmentation methods is crucial for epilepsy imaging.

