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Automation and improvement of WBC mechanical profiling in deformability cytometry
Sara Kaliman1, Shada Abuhattum1, Benedikt Hartmann2
1Max-Planck-Zentrum für Physik und Medizin, 91054 Erlangen, Germany; Max Planck Institute for the Science of Light, 91058 Erlangen, Germany.
Biophysical Journal
|October 11, 2025
Summary
This study introduces an automated method for classifying white blood cells (WBCs) using deformability cytometry (DC). The new unsupervised framework improves reproducibility and processing speed for cell mechanics analysis.
Area of Science:
- Biophysics
- Cell Biology
- Medical Diagnostics
Background:
- Deformability cytometry (DC) offers high-throughput mechanical profiling of blood cells.
- Label-free classification of white blood cells (WBCs) is challenging.
- Current analysis relies on manual gating, limiting scalability and reproducibility.
Purpose of the Study:
- To develop a fully automated and generalizable framework for WBC classification in DC experiments.
- To overcome limitations of supervised models and manual gating.
- To enable accurate mechanophenotyping of WBCs, including activated cells.
Main Methods:
- Utilized box filters and unsupervised clustering for cell population analysis.
- Employed cell shape features from high-accuracy segmentation and texture features from bright-field images.
- Derived shape features from the original contour, not the convex hull, for improved accuracy.
Main Results:
- Validated the automated method against manual gating across diverse experimental conditions (donors, anticoagulants, collection sources, brightness).
- Demonstrated consistent reliability and robustness of the automated classification.
- Enabled inclusion and morphological characterization of WBCs with membrane protrusions.
Conclusions:
- The automated framework enhances accuracy, consistency, and scalability of WBC mechanophenotyping.
- This approach facilitates high-throughput analysis across large patient cohorts.
- The method improves reproducibility and reduces processing time compared to manual gating.

