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A Reproducible, Data-Driven Approach to Mapping Species Distributions Using Presence-Only Data and Biogeographic

Cristian S Montalvo-Mancheno1, Jessie C Buettel1,2, Stefania Ondei1

  • 1School of Natural Sciences University of Tasmania Sandy Bay Australia.

Ecology and Evolution
|October 13, 2025
PubMed
Summary
This summary is machine-generated.

We developed a data-driven method to map species' extent of occurrence (EOO) using presence-only data, offering a reproducible alternative to expert range maps for biodiversity research.

Keywords:
biogeographic regionalizationconservation biogeographykernel density estimationmacroecologypresence‐only dataspecies distribution

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Area of Science:

  • Macroecology and Biogeography
  • Spatial Ecology
  • Biodiversity Informatics

Background:

  • Expert-derived range maps are standard in macroecological and biogeographic studies.
  • These maps suffer from subjectivity, taxonomic bias, and inconsistent handling of species absences.
  • Existing methods lack scalability and consistency for large-scale biodiversity assessments.

Purpose of the Study:

  • To develop a reproducible, data-driven approach for estimating species' extent of occurrence (EOO).
  • To create objective and scalable range maps as an alternative to expert-derived maps.
  • To assess the approach's applicability across diverse taxa and spatial scales.

Main Methods:

  • Utilized presence-only data and Australian subregions (Interim Biogeographic Regionalization for Australia - IBRA).
  • Employed a Gaussian kernel density estimator calibrated for spatial coherence and ecological realism.
  • Applied the method to Australian birds and validated against expert-derived maps, then extended to other taxa.

Main Results:

  • The data-driven EOO maps showed variable concordance with expert maps, higher for terrestrial birds.
  • Richness estimates varied by spatial scale, with lower errors at coarser biogeographic scales.
  • The approach successfully generated EOO maps for birds, amphibians, mammals, reptiles, and vascular plants, revealing subpopulations.

Conclusions:

  • The developed approach offers an objective, scalable, and consistent alternative to expert-derived range maps.
  • It minimizes sampling bias and internal discontinuities in EOO estimation.
  • The adaptable method supports large-scale ecological research and biodiversity conservation efforts.