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Updated: Jan 15, 2026

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In Situ Characterization of Hydrated Proteins in Water by SALVI and ToF-SIMS
Published on: February 15, 2016
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Strategies for Minimizing Interference from Metastable Water Clusters in ToF-SIMS 3D Imaging of Frozen Hydrated
Michael Bäumer1,2, Thorsten Adolphs1,2, Richard E Peterson1
1Institute of Physics, Universität Münster, Wilhelm-Klemm-Straße 10, 48149 Münster, Germany.
Journal of the American Society for Mass Spectrometry
|October 15, 2025
Summary
Cryogenic analysis using time-of-flight secondary ion mass spectrometry (ToF-SIMS) is crucial for biological samples. This study identifies and minimizes spectral interferences from water cluster ions, improving analyte detection in ToF-SIMS imaging.
Area of Science:
- Mass Spectrometry
- Analytical Chemistry
- Biophysics
Background:
- Cryogenic analysis of hydrated biological samples is essential for preserving native structures during time-of-flight secondary ion mass spectrometry (ToF-SIMS) imaging.
- Water cluster ions from ice cause spectral interferences, hindering analyte detection and leading to mass peak misassignments in ToF-SIMS.
Purpose of the Study:
- Investigate the water ice spectrum within a specific ToF mass analyzer.
- Understand and mitigate spectral interferences caused by water cluster ions in ToF-SIMS.
- Optimize ToF-SIMS analysis of cryogenic frozen hydrated biological samples.
Main Methods:
- Utilized a gridless multistage reflectron ToF mass analyzer with dual acceleration zones.
- Analyzed the water ice spectrum of a cryogenic frozen hydrated organic solution.
- Investigated the influence of analyzer settings on metastable water cluster ion peaks.
Main Results:
- Identified distinct metastable peaks from single and multiple water molecule losses in different drift zones.
- Determined that analyzer settings influence metastable peak positions and origins.
- Confirmed that background signals primarily stem from pure ((H2O)nH+) and cationized ((H2O)nR+) water clusters.
- Observed single H2O loss peaks between 200-415 m/z and multiple H2O loss peaks above 415 m/z.
Conclusions:
- Developed strategies to minimize spectral interference from metastable water cluster ions.
- The study provides a foundation for improved analyte detection in ToF-SIMS of hydrated biological samples.
- Understanding water cluster ion behavior is key to accurate mass spectrometry analysis of frozen samples.

