Visualizing the chronicle of multiple cell fates using a near-IR dual-RNA/DNA-targeting probe

Linawati Sutrisno1, Gary J Richards2, Jack D Evans3

  • 1International Center for Young Scientists (ICYS), National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan.

Science Advances
|October 22, 2025
PubMed

Insights

This study introduces a new imaging method using a pyrazinacene probe (TEG8-N14) for simultaneous RNA and DNA detection. It effectively distinguishes multiple cell death states, including early senescence, in UV-vis-sensitive cells.

Area of Science:

  • Cell Biology
  • Biochemistry
  • Molecular Imaging

Background:

  • Current cell fate assessment methods struggle with early detection and distinguishing multiple injury states, particularly in UV-vis-sensitive cells.
  • Limitations exist in capturing rapid cellular responses and differentiating diverse cell death pathways like apoptosis, necrosis, necroptosis, and senescence.

Purpose of the Study:

  • To develop a novel imaging technique for simultaneous RNA and DNA detection under near-infrared photoexcitation.
  • To enable discrimination of multiple cell states and capture early responses in UV-vis-sensitive cells.

Main Methods:

  • Utilized a pyrazinacene-based probe (TEG8-N14) for near-infrared photoexcitation.
  • Developed a method for simultaneous detection of RNA and DNA variations within single cells.
  • Applied the probe to live and fixed UV-vis-sensitive cells to assess different cell fate outcomes.

Main Results:

  • The TEG8-N14 probe successfully discriminated between apoptosis, necrosis, necroptosis, and senescence based on RNA/DNA changes.
  • TEG8-N14 selectively stained necrotic cells in live samples.
  • Post-fixation, the probe detected ultraearly senescence in UV-vis-sensitive cells, offering twofold greater information than existing fluorophores.

Conclusions:

  • The developed method overcomes current imaging barriers for UV-vis-sensitive cells.
  • This technique allows comprehensive visualization of single-cell fate histories without interference from UV-vis sensitivity or genetic manipulation.
  • The probe provides enhanced informational content for detailed cell state analysis.

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