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Updated: Jan 14, 2026

Determining the Likelihood of Variant Pathogenicity Using Amino Acid-level Signal-to-Noise Analysis of Genetic Variation
Published on: January 16, 2019
[Hearing phenotype of non-syndromic hearing loss caused by variants with different pathogenicity]
1ENT Institute and Department of Otorhinolaryngology, Eye ENT Hospital, Fudan University/NHC Key Laboratory of Hearing Medicine (Fudan University), Shanghai 200031, China.
Abstract:
The data of 14 patients with hearing loss and subjected to whole exome sequencing in Department of Otorhinolaryngology, Eye ENT Hospital, Fudan University between March 2024 and March 2025 were retrospectively analyzed. The patients were categorized into two groups: the pathogenic (P)/likely pathogenic (LP) group and the variant of uncertain significance (VUS) group. The P/LP group consisted of eight cases (three males and five females), while the VUS group included six cases (four males and two females). The median (Q1, Q3) age of onset in the P/LP group was significantly younger than that in the VUS group [9.0 (5.8, 12.0) years vs 27.5 (17.0, 33.3) years, P=0.014]. Hearing loss in the P/LP group was more severe than in the VUS group at specific frequencies, including 250 Hz (P=0.015), 500 Hz (P=0.023), and low frequencies (125-500 Hz, P=0.029). Hearing loss in the P/LP group was mainly sloping (9/16 ears), while in the VUS group it was either sloping (4/12 ears) or U-shaped (4/12 ears). The results suggest that early-onset, low-frequency sloping hearing loss is more likely associated with P/LP variants.
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