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Effect of a consistent reconstruction algorithm on inter-scanner reproducibility in diffusion MRI.

Qiang Liu1,2, Ante Zhu3, Xiaoqing Wang4

  • 1College of Engineering, Northeastern University, Boston, Massachusetts, USA.

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|October 28, 2025
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Summary
This summary is machine-generated.

Consistent reconstruction algorithms reduced inter-scanner variability in fractional anisotropy (FA) but not mean diffusivity (MD) in diffusion MRI (dMRI). Harmonization at the acquisition level is needed for robust cross-vendor comparability in dMRI studies.

Keywords:
Split‐GRAPPAdMRI harmonizationdiffusion MRIinter‐scannermicrostructurereproducibilitytractography

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Area of Science:

  • Neuroimaging
  • Medical Physics

Background:

  • Diffusion MRI (dMRI) is crucial for non-invasive brain microstructure and connectivity analysis.
  • Multi-center studies face reproducibility challenges due to inter-scanner variability from hardware, protocols, and reconstruction.
  • The impact of consistent reconstruction algorithms on inter-scanner reproducibility is largely unexplored.

Purpose of the Study:

  • To evaluate the impact of consistent reconstruction algorithms on cross-vendor, inter-scanner reproducibility in dMRI microstructure and tractography measures.
  • Assessing the effect of different reconstruction methods on variability in diffusion MRI data.

Main Methods:

  • Used identical single-shell dMRI protocols on two 3T scanners (Siemens Prisma, GE Premier).
  • Assessed three reconstruction methods: vendor-provided (Product), Split-GRAPPA, and L1-ESPIRiT.
  • Evaluated microstructure (FA, MD) and tractography (streamlines, wDice) measures for within- and inter-scanner variability.

Main Results:

  • Offline Split-GRAPPA significantly reduced inter-scanner variability in fractional anisotropy (FA) compared to the vendor-provided method (p < 0.001).
  • Mean diffusivity (MD) and tractography measures showed similar inter-scanner variability across reconstruction methods.
  • Inter-scanner variability remained significantly higher than within-scanner variability for both microstructural and tractography measures.

Conclusions:

  • The Split-GRAPPA reconstruction algorithm improved inter-scanner FA reproducibility but not MD reproducibility.
  • Consistent reconstruction algorithms with matched acquisition parameters did not enhance overall cross-vendor reproducibility in dMRI.
  • Further harmonization at the acquisition level (e.g., sequences) is essential for robust cross-vendor comparability in dMRI studies.