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Artificial Intelligence Driven Framework for the Design and Development of Next-Generation Avian Viral Vaccines
Muddapuram Deeksha Goud1, Elisa Ramos1, Abid Ullah Shah1
1Department of Veterinary Biomedical Sciences, College of Veterinary Medicine, Long Island University, Brookville, NY 11548, USA.
Microorganisms
|October 29, 2025
Summary
Artificial intelligence accelerates avian vaccine development by designing multi-epitope vaccines against poultry viruses like H5N1. This AI pipeline offers a scalable, data-driven approach for rapid vaccine creation, enhancing global poultry health.
Area of Science:
- Veterinary Medicine
- Immunology
- Bioinformatics
Background:
- Avian viral pathogens pose significant threats to poultry health and food security.
- Traditional vaccine development methods are often slow, expensive, and struggle with pathogen diversity.
Purpose of the Study:
- To develop an artificial intelligence (AI)-driven pipeline for designing, modeling, and optimizing multi-epitope vaccines against key avian viruses.
- To demonstrate the potential of AI in accelerating veterinary vaccinology.
Main Methods:
- Utilized machine learning and deep learning for epitope prediction, antigenicity assessment, and structural modeling (AlphaFold2).
- Selected B-cell and T-cell epitopes based on binding affinity, conservation, and immunogenicity.
- Incorporated adjuvants and linkers for enhanced construct stability and immune response; performed in silico immune simulations.
Main Results:
- AI pipeline successfully designed multi-epitope vaccines targeting avian RNA and DNA viruses (H5N1, NDV, IBV, IBDV, CAV, FPV).
- In silico simulations predicted strong humoral and cellular immune responses, including cytokine production and memory cell activation.
- Identified challenges including data quality, model interpretability, and ethical considerations.
Conclusions:
- AI offers a transformative and scalable approach for rapid, data-driven vaccine development in veterinary vaccinology.
- This AI-driven pipeline can significantly improve responses to emerging avian diseases and enhance global poultry health.
Keywords:
AlphaFold2artificial intelligence (AI)epitope predictionimmunoinformaticsin silico immune simulationmachine learning (ML)More Related Videos
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