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Clinician-in-the-loop screening saturation: predicting annotation yield for efficient EHR review
Assaf Landschaft1, Leena Abdelmoity2, Fatemeh Mohammad Alizadeh Chafjiri2
1Boston Children's Hospital, Harvard Medical School, Boston, MA, USA. assaf.landschaft@childrens.harvard.edu.
BMC Medical Informatics and Decision Making
|November 1, 2025
Summary
This study introduces a screening-saturation model to optimize manual chart reviews in Electronic Health Records (EHRs). The regression-based approach predicts residual yield, significantly reducing manual data annotation for rare-disease research.
Area of Science:
- Health Informatics
- Artificial Intelligence in Medicine
- Clinical Data Analysis
Background:
- Manual chart review of Electronic Health Records (EHRs) is time-consuming and costly, posing a challenge for retrospective studies, especially for rare diseases.
- Automated Natural Language Processing (NLP) tools improve efficiency but require updated data for accurate performance predictions.
- A need exists for models that predict the remaining data yield during chart review to optimize resource allocation.
Purpose of the Study:
- To develop and validate a regression-based 'screening-saturation' model to predict residual data yield in EHR chart reviews.
- To assess the model's performance in identifying true positives at various score thresholds.
- To enable data-driven staffing decisions for clinical workflows.
Main Methods:
- Trained four predictive models (linear, polynomial, support-vector regressions, and a neural network) on 2013 EHR data for pediatric status epilepticus.
- Validated model generalizability and performance using 2020 EHR data.
- Evaluated the proportion of true positives identified below specific score thresholds.
Main Results:
- The polynomial regression model demonstrated robust generalizability and interpretability across temporal data shifts.
- A 20% yield threshold identified 78.1% of true positives by reviewing only 14.6% of records (1,118/7,636).
- This approach achieved an 85.4% reduction in manual annotations, saving 6,518 annotations.
Conclusions:
- The proposed screening-saturation model offers a scalable and model-agnostic framework for optimizing chart review processes.
- It effectively translates AI scores into actionable staffing decisions within clinical workflows.
- The model is adaptable to various medical domains requiring efficient chart review and integrates with clinician-in-the-loop tools.
Keywords:
Annotation efficiencyArtificial intelligenceClinician in the loopElectronic health recordsMachine learningNatural language processingRetrospective cohort studiesStatus epilepticusSupport vector machineYield predictionMore Related Videos
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