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Published on: August 28, 2018
Automated Detection and Segmentation of Aortoiliac Calcified Plaques Using nnU-Net for Whole-Torso Atherosclerotic
Jianfei Liu1, Vivek Batheja1, Pritam Mukherjee1
1Radiology and Imaging Sciences, National Institutes of Health, Clinical Center, Bethesda, MD (J.L., V.B., P.M., T.S.M., R.M.S.).
Insights
This study introduces an automated method for detecting and segmenting aortoiliac plaque, enabling precise calcified plaque burden assessment. This approach aids in cardiovascular disease diagnosis and treatment.
Area of Science:
- Radiology and Medical Imaging
- Cardiovascular Imaging
- Artificial Intelligence in Healthcare
Background:
- Aortoiliac plaque burden is linked to cardiovascular disease (CVD).
- Current automated methods primarily focus on CT angiography for plaque burden analysis.
- Accurate quantification of calcified plaque is crucial for CVD risk assessment.
Purpose of the Study:
- To develop and validate an automated method for aortoiliac plaque detection and segmentation.
- To enable accurate quantification of calcified plaque burden from both non-contrast and contrast-enhanced CT scans.
- To assess the correlation of automated plaque burden assessment with clinical factors and diseases.
Main Methods:
- Utilized the nnU-Net framework for training an automated detection and segmentation model.
- Trained on diverse datasets including non-contrast PET-CT, contrast-enhanced CT urography, and various abdominal/chest CT scans.
- Evaluated detection and segmentation accuracy on multiple external datasets and assessed Agatston score correlation on paired scans.
Main Results:
- Achieved high detection performance with 88.1% precision, 99.5% recall, and 93.4% F1 score.
- Segmentation Dice scores ranged from 64.3-83.7%, significantly outperforming baseline methods.
- Demonstrated strong correlation (R²=0.99) between Agatston scores from paired CT scans.
- Identified significant correlations between calcified plaque burden and factors like age, sex, BMI, smoking, alcohol abuse, CVD, heart failure, myocardial infarction, and type 2 diabetes.
Conclusions:
- Automated aortoiliac plaque detection and segmentation provide accurate whole-torso atherosclerotic calcified burden assessment.
- This method holds potential for enhancing cardiovascular disease diagnosis.
- The findings suggest a pathway for improved CVD risk stratification and treatment strategies.
Rationale And Objectives:
Cardiovascular disease (CVD) is closely associated with aortoiliac plaque burden, yet current research on its automated detection and segmentation has largely focused on plaque burden analysis using CT angiography. In this study, we present an automated method for aortoiliac plaque detection and segmentation that enables accurate quantification of calcified plaque burden on both non-contrast and contrast-enhanced CT scans.
Materials And Methods:
The training data included 119 non-contrast whole-body PET-CT scans and 23 contrast-enhanced abdominopelvic CT urography scans, all obtained from our institution. The testing data comprised 99 contrast-enhanced thoracoabdominopelvic CT scans from the sarcopenia dataset; 93 from the prostate cancer dataset; 1214 paired non-contrast and contrast-enhanced abdominal CT scans from a renal donor cohort; 9199 non-contrast abdominal CT colonography scans from a second institution; and 1446 non-contrast chest CT scans from a third institution. The nnU-Net was used to train a model for aortoiliac plaque detection and segmentation. Detection accuracy was evaluated on non-contrast chest CT scans. Segmentation accuracy was assessed on CT scans with manually labeled plaque regions from the sarcopenia, prostate, renal donor, and CT colonography datasets. The correlation between Agatston scores on paired non-contrast and contrast-enhanced scans was evaluated in the renal donor cohort. Correlations between whole-torso calcified plaque burden (Agatston scores), demographics, and diseases were analyzed using multivariable analysis on the CT colonography dataset.
Results:
Aortoiliac plaques were detected with 88.1% precision, 99.5% recall, and a 93.4% F1 score. Segmentation achieved Dice scores of 64.3-83.7% across two internal contrast-enhanced and two external non-contrast CT datasets, outperforming baseline methods by over 10% (p < 0.001). Agatston scores from paired CT scans showed strong correlation (R2 = 0.99). Multivariate analysis showed calcified plaque burden assessment correlated with sex, age, BMI, and smoking (all p < 0.001), as well as alcohol abuse (p = 0.01). The calcified burden assessment was also correlated with CVD, heart failure, myocardial infarction (all p < 0.001), and type 2 diabetes (p = 0.03), but showed no correlation with cancer (p = 0.14) or femoral neck fracture (p = 0.61).
Conclusion:
Automated aortoiliac plaque detection enables accurate whole-torso atherosclerotic calcified burden assessment, offering a potential pathway for improved CVD diagnosis and treatment.
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