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A methodology for developing dermatological datasets: lessons from retrospective data collection for AI-based
Alma Pedro1,2, Pamela Romero3,4, Soledad Vidaurre5
1Department of Computer Science, Escuela de Ingeniería, Pontificia Universidad Católica de Chile, Santiago, Chile. aapedro@uc.cl.
BMC Medical Research Methodology
|November 5, 2025
Summary
This study introduces a practical methodology for creating high-quality dermatological datasets, focusing on skin tumor classification. The framework ensures reproducibility and scalability, addressing the need for multimodal data and diverse populations in AI-driven research.
Area of Science:
- Dermatology
- Medical Informatics
- Artificial Intelligence
Background:
- The advancement of artificial intelligence in dermatology necessitates standardized, high-quality datasets.
- Current dermatological datasets lack uniformity in development, hindering AI integration.
- There is a critical need for multimodal data, defined metadata standards, and inclusive population representation.
Purpose of the Study:
- To propose a practical methodology for creating structured dermatological datasets for skin tumor classification.
- To address the scarcity of health data by incorporating multimodal information and diverse populations.
- To establish a reproducible and scalable framework for dataset creation.
Main Methods:
- A four-stage methodology was developed: IRB approval and clinical information analysis, data recording and structuring, clinical data and image processing, and quality assessment.
- The methodology integrates clinical images and patient metadata from electronic health records.
- Experience from building datasets for Chilean and Mexican populations informed the methodology.
Main Results:
- The proposed methodology facilitates the creation of well-organized, reproducible dermatological datasets.
- Practical guidance is provided for common challenges, including image metadata and technical validation.
- The framework supports interdisciplinary collaboration between dermatologists and computer scientists.
Conclusions:
- A reproducible, scalable, and interdisciplinary framework for dermatological dataset creation is presented.
- The methodology is particularly beneficial for countries beginning dataset development.
- Recommendations and common pitfalls are highlighted to aid future dataset initiatives.

