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An Ex vivo Assay to Study Candida albicans Hyphal Morphogenesis in the Gastrointestinal Tract
Published on: July 1, 2020
Machine learning prediction of mortality in pediatric fungemia using the Candida score
Khouloud Abdulrahman Al-Sofyani1,2,3, Ibrahim Hussain Ali Muzaffar1,2, Abdulrahman Mohammedsaeed Baqasi1,2
1Department of Pediatrics, Faculty of Medicine, King Abdulaziz University, Jeddah, Saudi Arabia.
Abstract:
Pediatric fungemia in pediatric intensive care units (PICUs) carries high mortality. We evaluated whether the Candida Score, combined with clinical variables, predicts mortality after diagnosis using a prespecified multivariable logistic regression (primary model) and benchmarked discrimination against Random Forest and Gradient Boosting Machine. We analyzed 85 pediatric fungemia cases from a PICU (2016-2020). The prespecified primary model was multivariable logistic regression with predefined covariates; Random Forest and Gradient Boosting Machine were exploratory comparators. Discrimination was evaluated on a held-out test set and by 10-fold cross-validation and bootstrapping. In 85 cases, the median age was 6 months and median weight 4.8 kg; 62.4% were male. Candida albicans was the most prevalent species (37.6%). Of the subjects, 39 (45.9%) died and 46 (54.1%) survived. On the held-out test set (n = 17), logistic regression achieved accuracy 0.735 and AUC 0.800. Random Forest achieved AUC 0.861 (precision 1.000; recall 0.778), and Gradient Boosting achieved AUC 0.847 (precision 0.875; recall 0.778). Internal validation (10-fold cross-validation and bootstrap resampling) supported model stability.Conclusion Integrating the Candida Score with clinical predictors shows potential for mortality risk stratification after fungemia diagnosis. In this single-center cohort, Random Forest yielded the highest discrimination on the test set. Findings are exploratory and require external validation in larger, multicenter studies before clinical use.
Insights
Pediatric fungemia mortality can be predicted using the Candida Score and clinical factors. Machine learning models, particularly Random Forest, showed promising discrimination in this PICU study.
Area of Science:
- Critical Care Medicine
- Infectious Diseases
- Pediatrics
Background:
- Pediatric fungemia, a bloodstream fungal infection in children, is associated with high mortality rates, especially in pediatric intensive care units (PICUs).
- Accurate prediction of mortality risk is crucial for timely and effective clinical management of pediatric fungemia.
Purpose of the Study:
- To evaluate the predictive performance of the Candida Score combined with clinical variables for mortality in pediatric fungemia.
- To compare the discrimination of a multivariable logistic regression model against machine learning algorithms (Random Forest, Gradient Boosting Machine).
Main Methods:
- A retrospective analysis of 85 pediatric fungemia cases from a single PICU (2016-2020).
- A prespecified multivariable logistic regression model was used as the primary analysis.
- Random Forest and Gradient Boosting Machine were employed as exploratory comparative models.
- Model discrimination was assessed using a held-out test set and validated through 10-fold cross-validation and bootstrap resampling.
Main Results:
- The study included 85 pediatric patients with a median age of 6 months; 45.9% of patients died.
- On the test set, logistic regression achieved an AUC of 0.800.
- Random Forest demonstrated the highest discrimination with an AUC of 0.861, followed by Gradient Boosting (AUC 0.847).
Conclusions:
- Integrating the Candida Score with clinical predictors shows potential for stratifying mortality risk in pediatric fungemia.
- Machine learning models, especially Random Forest, may offer superior discrimination compared to traditional logistic regression in this context.
- These findings are exploratory and necessitate external validation in larger, multicenter cohorts before clinical implementation.
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