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Phage Phenomics: Physiological Approaches to Characterize Novel Viral Proteins
Published on: June 11, 2015
KlebPhaCol: a community-driven resource for Klebsiella research identified a novel phage family
Daniela Rothschild-Rodriguez1, Kai S Lambon1, Simran Krishnakant Kushwaha1
1School of Biological Sciences, University of Southampton, Southampton SO17 1BJ, Hampshire, United Kingdom.
Abstract:
The growing threat of multidrug-resistant Klebsiella pneumoniae, coupled with its role in gut colonisation, has intensified the search for new treatments, including bacteriophage therapy. Despite increasing documentation of Klebsiella-targeting phages, clinical applications remain limited, with key phage-bacteria interactions still poorly understood. A major obstacle is fragmented access to well-characterised phage-bacteria pairings, restricting the collective advancement of therapeutic and mechanistic insights. To address this gap, we created the Klebsiella Phage Collection (KlebPhaCol), an open resource comprising 52 phages and 74 Klebsiella isolates, characterised at phenotypic and genomic levels. These phages span six families-including a novel family, Felixviridae, associated with the human gut-and target 20 sequence types (including ST258, ST11, and ST14) and 19 capsular-locus types (including KL1 and KL2), across 6 Klebsiella species. Freely accessible at www.klebphacol.org, KlebPhaCol invites the scientific community to both use and contribute to this resource, fostering collaborative research and a deeper understanding of Klebsiella-phage interactions beyond therapeutic use.
Insights
The Klebsiella Phage Collection (KlebPhaCol) offers 52 characterized phages and 74 Klebsiella isolates to advance bacteriophage therapy research. This open resource aims to deepen understanding of phage-bacteria interactions for improved treatment strategies.
Area of Science:
- Microbiology
- Virology
- Genomics
Background:
- Multidrug-resistant Klebsiella pneumoniae poses a significant public health threat, necessitating novel therapeutic strategies like bacteriophage therapy.
- Clinical application of bacteriophages is hindered by limited understanding of phage-bacteria interactions and fragmented access to characterized phage-bacteria pairings.
Purpose of the Study:
- To establish an open-access resource of well-characterized Klebsiella phages and bacterial isolates.
- To facilitate research into Klebsiella-phage interactions for potential therapeutic and mechanistic insights.
Main Methods:
- Compilation of 52 Klebsiella-targeting phages and 74 Klebsiella isolates.
- Phenotypic and genomic characterization of the phages and isolates.
- Inclusion of phages spanning six families, including the novel gut-associated Felixviridae.
Main Results:
- The Klebsiella Phage Collection (KlebPhaC) comprises 52 phages and 74 isolates, targeting 20 sequence types and 19 capsular-locus types across 6 Klebsiella species.
- The collection includes phages from six families, notably the novel Felixviridae family.
- The resource is publicly accessible at www.klebphacol.org.
Conclusions:
- KlebPhaC addresses the need for accessible, characterized phage-bacteria data to advance bacteriophage therapy for Klebsiella infections.
- The resource promotes collaborative research to deepen the understanding of Klebsiella-phage interactions.
- This initiative supports the development of novel treatments against multidrug-resistant Klebsiella pneumoniae.
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