KlebPhaCol: a community-driven resource for Klebsiella research identified a novel phage family

Daniela Rothschild-Rodriguez1, Kai S Lambon1, Simran Krishnakant Kushwaha1

  • 1School of Biological Sciences, University of Southampton, Southampton SO17 1BJ, Hampshire, United Kingdom.

Nucleic Acids Research
|November 20, 2025
PubMed

Insights

The Klebsiella Phage Collection (KlebPhaCol) offers 52 characterized phages and 74 Klebsiella isolates to advance bacteriophage therapy research. This open resource aims to deepen understanding of phage-bacteria interactions for improved treatment strategies.

Area of Science:

  • Microbiology
  • Virology
  • Genomics

Background:

  • Multidrug-resistant Klebsiella pneumoniae poses a significant public health threat, necessitating novel therapeutic strategies like bacteriophage therapy.
  • Clinical application of bacteriophages is hindered by limited understanding of phage-bacteria interactions and fragmented access to characterized phage-bacteria pairings.

Purpose of the Study:

  • To establish an open-access resource of well-characterized Klebsiella phages and bacterial isolates.
  • To facilitate research into Klebsiella-phage interactions for potential therapeutic and mechanistic insights.

Main Methods:

  • Compilation of 52 Klebsiella-targeting phages and 74 Klebsiella isolates.
  • Phenotypic and genomic characterization of the phages and isolates.
  • Inclusion of phages spanning six families, including the novel gut-associated Felixviridae.

Main Results:

  • The Klebsiella Phage Collection (KlebPhaC) comprises 52 phages and 74 isolates, targeting 20 sequence types and 19 capsular-locus types across 6 Klebsiella species.
  • The collection includes phages from six families, notably the novel Felixviridae family.
  • The resource is publicly accessible at www.klebphacol.org.

Conclusions:

  • KlebPhaC addresses the need for accessible, characterized phage-bacteria data to advance bacteriophage therapy for Klebsiella infections.
  • The resource promotes collaborative research to deepen the understanding of Klebsiella-phage interactions.
  • This initiative supports the development of novel treatments against multidrug-resistant Klebsiella pneumoniae.

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