CRISPR/Cas9-mediated editing of XPA in induced pluripotent stem cells: A model for investigating Xeroderma

Marianthi Papadopoulou1, Haribaskar Ramachandran2, Stephanie Binder1

  • 1Environmental Adaptation and Cellular Resilience Laboratory, IUF-Leibniz Research Institute for Environmental Medicine, Düsseldorf, Germany.

Stem Cell Research
|November 20, 2025
PubMed

Insights

Researchers created a Xeroderma pigmentosum group A (XPA) gene-edited stem cell model. This tool aids in understanding DNA repair defects and developing treatments for XPA-related conditions.

Area of Science:

  • Genetics
  • Molecular Biology
  • Stem Cell Research

Background:

  • Xeroderma pigmentosum group A (XPA) is crucial for DNA repair, specifically removing UV-induced DNA damage via the nucleotide excision repair (NER) pathway.
  • Defects in XPA lead to impaired DNA repair, causing genomic instability, mutations, and a high predisposition to skin cancers.

Purpose of the Study:

  • To engineer a human induced pluripotent stem cell (iPSC) line with a specific XPA mutation using CRISPR/Cas9 technology.
  • To establish a validated isogenic model for studying the molecular effects of XPA deficiency.

Main Methods:

  • CRISPR/Cas9 gene editing was employed to introduce a homozygous single nucleotide variant in exon 3 of the XPA gene in human iPSCs.
  • Characterization of the engineered iPSC line included assessment of morphology, pluripotency marker expression, and differentiation potential into three germ layers.

Main Results:

  • A CRISPR/Cas9-engineered human iPSC line (WTSIi018-B-30) with a defined XPA mutation was successfully generated.
  • The resulting iPSCs maintained normal cellular morphology and pluripotency markers.
  • The mutant iPSCs demonstrated the capacity to differentiate into all three primary germ layers, confirming their pluripotency.

Conclusions:

  • The developed XPA-mutant iPSC line serves as a valuable isogenic research model.
  • This model facilitates in-depth investigation into the molecular mechanisms underlying XPA deficiency.
  • It offers a platform for exploring and testing potential therapeutic interventions for diseases associated with XPA.