Related Experiment Video
Updated: Jun 17, 2026

07:42
MRI-guided Disruption of the Blood-brain Barrier using Transcranial Focused Ultrasound in a Rat Model
Published on: March 13, 2012
18.4K
3D MR Thermometry Using Bi-Directional Segmented EPI for Transcranial-Focused Ultrasound
Michael Malmberg1,2, Seong-Eun Kim2, John Roberts2
1Department of Biomedical Engineering, University of Utah, Salt Lake City, Utah, USA.
Magnetic Resonance in Medicine
|November 24, 2025
Summary
Three-dimensional segmented EPI-based thermometry (segEPI) offers a feasible and accurate alternative to 2D clinical thermometry. This advanced method provides comparable precision and scan times, enhancing the understanding of heating extent.
Area of Science:
- Magnetic Resonance Imaging
- Medical Physics
- Thermal Therapy Monitoring
Background:
- Clinical 2D thermometry is the standard for monitoring thermal therapies.
- Limitations exist in 2D thermometry regarding accuracy and spatial coverage.
- Advancements in MRI sequences may offer improved thermometry solutions.
Purpose of the Study:
- To assess the feasibility of replacing 2D thermometry with 3D segmented EPI-based thermometry (segEPI).
- To evaluate if 3D segEPI achieves equivalent accuracy, precision, and scan time.
- To determine the potential for rapid clinical integration of 3D segEPI.
Main Methods:
- Modified a 3D segEPI sequence for bidirectional readouts.
- Integrated the modified sequence into a clinical protocol.
- Performed focused ultrasound sonication in phantoms and in vivo scans to compare 3D segEPI with 2D thermometry, analyzing accuracy, precision, and heating extent at various interpolation levels.
Main Results:
- 3D segEPI demonstrated high agreement with 2D clinical thermometry.
- Temperature agreement remained within ±1°C with 0.5 mm in-plane voxel spacing.
- 3D segEPI provided better characterization of heating distribution, though with a slightly wider full-width at half maximum (∼17%).
- Echo combination in segEPI improved temperature estimate precision.
Conclusions:
- 3D segEPI thermometry is a viable and promising alternative to current 2D clinical methods.
- The technique shows potential for seamless integration into existing clinical workflows.
- 3D segEPI enhances the monitoring of thermal therapies with improved spatial information.

