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Updated: Jan 10, 2026

PIP-on-a-chip: A Label-free Study of Protein-phosphoinositide Interactions
Published on: July 27, 2017
Phospholipid-independent biogenesis of a functional RP4 conjugation pilus
Naito Ishimoto1,2, Shan He1, Mikhail Bogdanov3
1Department of Life Sciences, Imperial College London, London SW7 2AZ, UK.
Abstract:
Conjugation, the process of DNA transfer between bacteria, is initiated universally by the formation of a mating pair formation (MPF) via a conjugative pilus. Conjugation of the IncP RP4 plasmid is mediated by short, non-retractable, rigid mating pili. Here, we report the cryo-EM structure of the RP4 pilus at 2.75 Å resolution. Uniquely, and consistently with quantitative mass spectral analysis, this revealed that the cyclic TrbC pilin subunit is not lipidated. Consistently, an E. coli pgsA mutant lacking phosphatidylglycerol (PG) can serve as a donor of RP4 but not of R27, encoding the H-pilus consisting of PG-associated cyclic pilin subunits (TrhA). The RP4 is the first example of a lipid-independent functional mating pilus. This discovery not only challenges the long-held assumption that an amphipathic lipid moiety is essential for the construction of conjugative pili and for MPF, but also expanding our understanding of the diverse mechanisms that bacteria employ to transfer genetic material.
Insights
Researchers discovered the RP4 pilus, a lipid-independent bacterial conjugation structure. This finding challenges the essential role of lipids in mating pair formation (MPF) and expands understanding of bacterial DNA transfer mechanisms.
Area of Science:
- Microbiology
- Structural Biology
- Molecular Biology
Background:
- Bacterial conjugation relies on mating pair formation (MPF) initiated by conjugative pili.
- IncP RP4 plasmid conjugation involves short, rigid mating pili.
Purpose of the Study:
- To determine the cryo-EM structure of the RP4 pilus.
- To investigate the role of lipid modification in pilus formation and function.
Main Methods:
- Cryo-electron microscopy (cryo-EM) at 2.75 Å resolution.
- Quantitative mass spectral analysis.
- Analysis of *E. coli pgsA* mutant strains.
Main Results:
- The RP4 pilus structure revealed non-lipidated cyclic TrbC pilin subunits.
- RP4 conjugation occurs in *E. coli pgsA* mutants lacking phosphatidylglycerol (PG).
- R27 plasmid conjugation, dependent on PG-associated pilin subunits (TrhA), fails in these mutants.
Conclusions:
- The RP4 pilus is the first identified lipid-independent functional mating pilus.
- Challenges the necessity of lipid moieties for conjugative pilus construction and MPF.
- Expands understanding of bacterial genetic material transfer mechanisms.
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