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Fully Automated AI-Based Digital Workflow for Mirroring of Healthy and Defective Craniofacial Models
Michel Beyer1,2, Julian Grossi1,2, Alexandru Burde3
1Department of Oral and Cranio-Maxillofacial Surgery, University Hospital Basel, 4031 Basel, Switzerland.
Journal of Imaging
|November 26, 2025
Summary
This study introduces an automated digital pipeline for craniofacial reconstruction, using deep learning for precise anatomical segmentation and algorithmic mirroring. The system offers standardized, reproducible, and time-efficient planning for complex surgical cases.
Area of Science:
- Medical Imaging
- Computer-Aided Surgery
- Biomedical Engineering
Background:
- Accurate craniofacial reconstruction relies on precise segmentation and mirroring of anatomical structures.
- Current manual methods are time-consuming and prone to operator variability, impacting surgical planning.
- Developing automated solutions is crucial for improving efficiency and reproducibility in craniofacial defect repair.
Purpose of the Study:
- To develop and validate a fully automated digital pipeline for craniofacial reconstruction.
- To integrate deep learning-based segmentation with algorithmic mirroring for enhanced precision.
- To establish a standardized, time-efficient workflow for surgical planning.
Main Methods:
- Utilized 388 cranial CT scans to train a 3D nnU-Net model for skull and mandible segmentation.
- Employed a Principal Component Analysis-Iterative Closest Point (PCA-ICP) algorithm for symmetry plane computation and mirroring.
- Quantified accuracy using Dice Similarity Coefficient (DSC), Mean Surface Distance (MSD), Hausdorff Distance (HD), and angular deviation compared to expert references.
Main Results:
- The nnU-Net model achieved high segmentation accuracy (mandible DSC: 0.956, skull DSC: 0.965).
- Automated mirroring demonstrated minimal angular deviation from expert planes (mandible: 1.32° ± 0.71°, skull: 1.75° ± 0.84° in defect cases).
- The workflow showed robust performance and accuracy, unaffected by the presence of defects.
Conclusions:
- The developed automated digital pipeline offers a standardized, reproducible, and time-efficient solution for craniofacial reconstruction.
- This approach enhances precision in segmentation and mirroring, improving surgical planning.
- The validated workflow shows significant clinical applicability for treating craniofacial defects.

