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Predictive Fermentation Control of Lactiplantibacillus plantarum Using Deep Learning Convolutional Neural Networks
Chien-Chang Wu1, Jung-Sheng Chen2, Yu-Ching Lu3
1Institute of Biotechnology and Chemical Engineering, I-Shou University, Kaohsiung 840203, Taiwan.
Microorganisms
|November 27, 2025
Summary
This study uses deep learning (CNNs) to predict Lactiplantibacillus plantarum fermentation success early. The system accurately forecasts outcomes, enabling timely interventions to improve probiotic production efficiency.
Area of Science:
- Biotechnology
- Microbial Fermentation
- Artificial Intelligence in Bioprocessing
Background:
- Microbial fermentation, particularly with Lactiplantibacillus plantarum, is complex due to nonlinear growth dynamics.
- Traditional monitoring methods lack the foresight for early intervention in fermentation processes.
- Predicting fermentation outcomes requires advanced analytical approaches beyond conventional monitoring.
Purpose of the Study:
- To develop a deep learning-based system for classifying fermentation trajectories and predicting final cell counts.
- To utilize early-stage fermentation data (first 24 hours) for predictive modeling.
- To enhance real-time control and efficiency in industrial probiotic production.
Main Methods:
- Convolutional Neural Networks (CNNs) were employed for classification of fermentation outcomes.
- Real-time fermentation parameters (pH, temperature, dissolved oxygen) were recorded and transformed into time-series features.
- A dataset of 52 fermentation runs was used for training and validation of the predictive model.
Main Results:
- The CNN model achieved a high classification accuracy of 97.87% for predicting fermentation success, semi-success, or failure.
- The deep learning model outperformed benchmark models like LSTM and XGBoost in predictive accuracy.
- Early predictions from the model facilitated manual interventions, preventing batch failures and improving suboptimal fermentations.
Conclusions:
- Deep learning offers a robust and scalable framework for real-time fermentation control.
- The proposed CNN-based system demonstrates significant potential for enhancing efficiency and reducing costs in industrial probiotic production.
- Predictive modeling using early fermentation data is crucial for optimizing bioprocess outcomes.
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