Related Experiment Video
Updated: Jan 10, 2026

09:34
Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
34.5K
XRCC1 Arg399Gln Genetic Variant Increases Colorectal Cancer Susceptibility: A Comprehensive Meta-Analysis
Praveen Kumar Kampalli1, Mohan Krishna Ghanta2, Rishitha Chowdary Mavillapalli3
1Department of Bioscience & Biotechnology, Banasthali University, Rajasthan, India.
Asian Pacific Journal of Cancer Prevention : APJCP
|November 28, 2025
Summary
The XRCC1 Arg399Gln polymorphism is linked to a higher risk of colorectal cancer (CRC). However, other XRCC1 gene variants, Arg194Trp and Arg280His, do not show a significant association with CRC risk.
Area of Science:
- Genetics and Cancer Epidemiology
- Molecular Biology and Disease Risk
Background:
- Colorectal cancer (CRC) is a leading cause of cancer mortality globally.
- Inherited genetic variants in DNA repair enzymes, such as XRCC1, are implicated in CRC risk.
- Previous studies on XRCC1 polymorphisms and CRC risk have yielded inconsistent results across populations.
Purpose of the Study:
- To conduct a comprehensive meta-analysis evaluating the association between three common XRCC1 gene polymorphisms (Arg194Trp, Arg280His, and Arg399Gln) and colorectal cancer risk.
- To synthesize evidence from multiple case-control studies to clarify the role of XRCC1 variants in CRC susceptibility.
Main Methods:
- A meta-analysis combining data from 52 independent case-control studies.
- Specific analyses included 23 studies for Arg194Trp, 8 for Arg280His, and 42 for Arg399Gln.
- Statistical methods were employed to assess the overall risk and explore potential ethnic variations.
Main Results:
- A statistically significant correlation was found between the XRCC1 Arg399Gln polymorphism and an increased risk of colorectal cancer (OR = 1.10, 95% CI = 1.01-1.20).
- Subgroup analyses by ethnicity (Asian and Caucasian populations) did not reveal a significant association between any of the studied XRCC1 polymorphisms and CRC risk.
- No evidence of publication bias was detected in the meta-analysis.
Conclusions:
- The XRCC1 Arg399Gln polymorphism may be associated with increased susceptibility to colorectal cancer.
- The XRCC1 Arg194Trp and Arg280His polymorphisms are not significantly associated with colorectal cancer risk.
- Further research may be warranted to elucidate the precise role of XRCC1 variants in colorectal cancer development.
Related Concept Videos
Single Nucleotide Polymorphisms-SNPs
17.9K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
17.9K
Genome-wide Association Studies-GWAS
15.2K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
15.2K

