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Explainable AI-Driven Comparative Analysis of Machine Learning Models for Predicting HIV Viral Nonsuppression in
Francis Ngema1, Albert Whata2, Micheal Olusanya3
1Centre of Applied Data Science, University of Johannesburg, Johannesburg, South Africa.
JMIR AI
|December 8, 2025
Summary
Machine learning accurately predicts HIV viral nonsuppression in Uganda. Adherence assessment is the key predictor, enabling targeted interventions for people living with HIV on antiretroviral therapy.
Area of Science:
- Machine Learning in Public Health
- Artificial Intelligence in Medicine
- HIV/AIDS Research
Background:
- HIV viral suppression is critical for patient health and reducing transmission.
- Uganda faces significant public health challenges due to HIV/AIDS.
- Explainable AI (XAI) is underutilized, limiting transparency in HIV models.
Purpose of the Study:
- Develop and compare ML models to predict viral nonsuppression in Ugandan HIV patients on ART.
- Apply XAI techniques to identify key predictors and enhance model interpretability.
- Demonstrate population-level and individual-level insights for clinical utility.
Main Methods:
- Retrospective analysis of 1101 Ugandan patients on ART (June 2016-April 2018).
- Compared 8 ML algorithms, using XGBoost as the best-performing model.
- Employed XAI techniques (SHAP) for global and local prediction explanations.
Main Results:
- XGBoost model achieved high performance (AUC 0.80, accuracy 0.89).
- Adherence assessment was the strongest predictor of viral nonsuppression.
- Age group, urban residence, and ART duration were also significant predictors.
Conclusions:
- XGBoost model effectively predicts viral nonsuppression in Ugandan HIV patients.
- XAI identified adherence as the primary risk factor, guiding interventions.
- Transparent ML models can improve clinical decision-making in resource-limited settings.

