Fragment to framework: automatic fragmentation of covalent organic frameworks into building blocks for band gap
Michelle Ernst1, Rostislav Fedorov2,3, Alessandro Calzolari3
1Institute of Geological Sciences, University of Bern 3012 Bern Switzerland michelle.ernst@unibe.ch.
None:
Understanding structure-property relationships in ordered functional materials is essential for their rational design and optimisation. Fragment-based approaches relating materials' properties to those of their building blocks (fragments) are intuitive to chemistry and have been successfully applied in the design of metal-organic frameworks (MOFs). However, covalent organic frameworks (COFs) are resistant to such in silico fragmentation due to their covalent bonds and ambiguous definitions of nodes and linkers. Here we introduce a new algorithm, deCOFpose, designed to systematically fragment COFs into building blocks according to chemically intuitive rules, enabling fragment-based structure-property analysis, and exemplify the latter for COF band gaps. Our results reveal that the electronic features (e.g., energies of the frontier molecular orbitals) of the building blocks alone are insufficient to fully represent these materials, and the inclusion of their topological characteristics is required to engineer bespoke COFs with desired band structures.
Related Concept Videos
MO Theory and Covalent Bonding
Mass Spectrometry: Molecular Fragmentation Overview
One type of fragmentation pattern is the cleavage of a single bond in the molecular ion. The cleavage leads to a radical and a cation. The cleavage can occur at...
Crystal Field Theory - Octahedral Complexes
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
Network Covalent Solids
To break or to melt a covalent network solid, covalent bonds must be broken. Because covalent bonds are relatively strong, covalent network solids are typically...
Molecular Models


