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Single-Cell Multi-Omics Sequencing Technologies and Their Applications in Livestock and Poultry Research
Jinping Cao1, Xiaohan Zhou1, Jie Liu1
1College of Animal Science, South China Agricultural University, Guangzhou 510642, China.
Journal of Agricultural and Food Chemistry
|December 11, 2025
Summary
Single-cell multiomics provides unprecedented detail on cellular differences in livestock and poultry. This technology reveals rare cell types crucial for understanding economically important traits and improving animal science.
Area of Science:
- Animal Science
- Genomics
- Molecular Biology
Background:
- Conventional bulk sequencing averages signals, obscuring cellular heterogeneity.
- Single-cell multiomics integrates genomics, epigenomics, transcriptomics, and proteomics at the single-cell level.
- This approach overcomes bulk sequencing limitations for high-resolution molecular mapping.
Purpose of the Study:
- To review the development and principles of single-cell multiomics technologies.
- To summarize applications in livestock and poultry research.
- To discuss challenges and future opportunities in the field.
Main Methods:
- Systematic review of single-cell multiomics sequencing technologies.
- Analysis of applications in livestock and poultry research.
- Identification of current challenges and future directions.
Main Results:
- Single-cell multiomics enables detailed resolution of cellular heterogeneity.
- It allows identification of rare, functionally critical cell subpopulations.
- Applications include dissecting biological bases of reproduction, growth, meat production, and disease resistance in livestock and poultry.
Conclusions:
- Single-cell multiomics is a powerful tool for understanding desirable phenotypes in livestock and poultry.
- It offers novel approaches to animal science research.
- The field presents significant opportunities for future advancements.
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